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Meg22_810_Bin_48_scaffold_9278

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_810_Bin_48_scaffold_9278_1
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(235..537)
DNA (303bp) protein (101aa)
id=18248688 bin=AR5_curated_draft tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
Meg22_810_Bin_48_scaffold_9278_2

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comp(1090..1920)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E7644
Marine sediment metagenome DNA, contig: S01H1_S12770 {ECO:0000313|EMBL:GAF99732.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Meg22_810_Bin_48_scaffold_9278_3
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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2013..2315
DNA (303bp) protein (101aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
2'-5' RNA ligase n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T7N0_METSL
2'-5' RNA ligase
Meg22_810_Bin_48_scaffold_9278_4
Fervidicoccus fontis, Fervidicoccus, Fervidicoccales, Thermoprotei, Crenarchaeota, Archaea

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2260..2553
DNA (294bp) protein (98aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1163730 species="Archaea; Crenarchaeota; Thermoprotei; Fervidicoccales; Fervidicoccaceae; Fervidicoccus.;" source="Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940).;"
2'-5' RNA ligase, Lig T n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A2C9_FERFK
2'-5' RNA ligase
Meg22_810_Bin_48_scaffold_9278_5
AR5, Aenigmarchaeota, DPANN, Archaea

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2555..2932
DNA (378bp) protein (126aa)
transmembrane_regions id=18248686 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
Meg22_810_Bin_48_scaffold_9278_6
CG_Micra_04, Micraarchaeota, Archaea

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3210..6104
DNA (2895bp) protein (965aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=5043974 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Tax=CG_Micra_04
Meg22_810_Bin_48_scaffold_9278_7
AR5, Aenigmarchaeota, DPANN, Archaea

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6106..7125
DNA (1020bp) protein (340aa)
phosphoesterase RecJ domain protein id=18248765 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
Meg22_810_Bin_48_scaffold_9278_8
Sulfolobus acidocaldarius, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(7126..7380)
DNA (255bp) protein (85aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase suspected. See adjacent gene [Meg22_810_Bin_48_scaffold_9278_9].
fibrillarin
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=3 Tax=Sulfolobus acidocaldarius RepID=FLPA_SULAC
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1435377 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus acidocaldarius SUSAZ.;"
Meg22_810_Bin_48_scaffold_9278_9
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(7386..7772)
DNA (387bp) protein (129aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D3F2_METSW
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
Meg22_810_Bin_48_scaffold_9278_10
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(7769..8728)
DNA (960bp) protein (320aa)
rRNA biogenesis Nop5/Nop56-like protein; K14564 nucleolar protein 56 id=18248762 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit
Tax=AR5
Meg22_810_Bin_48_scaffold_9278_11
unknown

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8789..8977
DNA (189bp) protein (63aa)

This feature has no annotations

Meg22_810_Bin_48_scaffold_9278_12
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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comp(8985..9287)
DNA (303bp) protein (101aa)
id=5802439 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
Meg22_810_Bin_48_scaffold_9278_13
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(9317..10387)
DNA (1071bp) protein (357aa)
DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] id=18248734 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
DNA topoisomerase ATP-hydrolyzing
Tax=AR5
Meg22_810_Bin_48_scaffold_9278_14
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(10388..11935)
DNA (1548bp) protein (516aa)
type 2 DNA topoisomerase 6 subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=18248735 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
DNA topoisomerase VI, subunit B
Tax=AR5
Meg22_810_Bin_48_scaffold_9278_15
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(11932..12414)
DNA (483bp) protein (161aa)
RNA-processing protein; K06961 ribosomal RNA assembly protein id=18248736 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
RNA-processing protein
Tax=AR5
Meg22_810_Bin_48_scaffold_9278_16

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comp(12433..12723)
DNA (291bp) protein (97aa)
translation initiation factor IF-1A; K03236 translation initiation factor 1A id=18248737 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
translation initiation factor eIF-1A
Meg22_810_Bin_48_scaffold_9278_17
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(12766..13392)
DNA (627bp) protein (209aa)
Nmd3 id=18248739 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
NMD3 family protein
Tax=AR5
Meg22_810_Bin_48_scaffold_9278_18
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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comp(13515..13781)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00035F7A07
acylphosphatase
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
Meg22_810_Bin_48_scaffold_9278_19
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(14510..14803)
DNA (294bp) protein (98aa)
hypothetical protein id=18248549 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
Meg22_810_Bin_48_scaffold_9278_trna_1
unknown

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comp(14816..14888)
DNA (73bp)
transferRNA Val
Meg22_810_Bin_48_scaffold_9278_20
unknown

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15182..15787
DNA (606bp) protein (202aa)

This feature has no annotations

Meg22_810_Bin_48_scaffold_9278_21
AR5, Aenigmarchaeota, DPANN, Archaea

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15838..16101
DNA (264bp) protein (88aa)
PRC-barrel domain-containing protein id=18248550 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
PRC-barrel domain-containing protein
Tax=AR5
Meg22_810_Bin_48_scaffold_9278_22
unknown

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16166..16645
DNA (480bp) protein (160aa)

This feature has no annotations

Meg22_810_Bin_48_scaffold_9278_23
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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16650..16907
DNA (258bp) protein (86aa)
vorD; 2-ketoisovalerate ferredoxin oxidoreductase subunit delta (EC:1.2.7.7) id=17039988 bin=RBG_16_Aminicenantes_63_16_plus species=Thermococcus litoralis genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
pyruvate synthase, gamma subunit
Probable pyruvate synthase, gamma subunit {ECO:0000313|EMBL:CAG35928.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
Meg22_810_Bin_48_scaffold_9278_24
AR5, Aenigmarchaeota, DPANN, Archaea

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16907..17890
DNA (984bp) protein (328aa)
porA; pyruvate synthase subunit alpha (EC:1.2.7.1) id=18248554 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Tax=AR5
Meg22_810_Bin_48_scaffold_9278_25

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17894..18643
DNA (750bp) protein (250aa)
PorB_1; pyruvate ferredoxin oxidoreductase subunit beta; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] id=5050399 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
2-oxoacid:ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:KHO47393.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
thiamine pyrophosphate binding domain-containing protein
Meg22_810_Bin_48_scaffold_9278_26
AR5, Aenigmarchaeota, DPANN, Archaea

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18801..19232
DNA (432bp) protein (144aa)
alias=gwa2_scaffold_5599_4 id=18248557 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
Meg22_810_Bin_48_scaffold_9278_27
unknown

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19291..19524
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying 28 items

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