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Meg22_810_Bin_76_scaffold_2397

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_810_Bin_76_scaffold_2397_1
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

1..237
DNA (237bp) protein (79aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase id=4830472 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Meg22_810_Bin_76_scaffold_2397_2
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

234..1040
DNA (807bp) protein (269aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase id=4305164 bin=GWC2_OP3_44_8 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Meg22_810_Bin_76_scaffold_2397_3
CG_Omnitr_07, Omnitrophica, Bacteria

Not on your lists

1053..1925
DNA (873bp) protein (291aa)
Dihydrodipicolinate synthase id=2598700 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
dihydrodipicolinate synthase
Tax=CG_Omnitr_07
Meg22_810_Bin_76_scaffold_2397_4
CG_Omnitr_04, Omnitrophica, Bacteria

Not on your lists

1928..2686
DNA (759bp) protein (253aa)
dapB1; dihydrodipicolinate reductase (EC:1.3.1.26)
UPI0001DE9A02 related cluster id=4208817 bin=GWA2_OP3_53_43 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
Tax=CG_Omnitr_04
Meg22_810_Bin_76_scaffold_2397_5
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

2686..3915
DNA (1230bp) protein (410aa)
diguanylate cyclase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B557B0
putative diguanylate cyclase with GAF sensor
Tax=RBG_13_OP3X_46_9_curated
Meg22_810_Bin_76_scaffold_2397_6
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

3919..5088
DNA (1170bp) protein (390aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.-)
LL-diaminopimelate aminotransferase id=4012472 bin=GWF2_OP3_43_52 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RBG_13_OP3X_46_9_curated
Meg22_810_Bin_76_scaffold_2397_7
GWB2_WOR_2_45_9_curated, WOR-2, Bacteria

Not on your lists

5088..6395
DNA (1308bp) protein (436aa)
pantoate/beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase id=4012473 bin=GWF2_OP3_43_52 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=GWB2_WOR_2_45_9_curated
Meg22_810_Bin_76_scaffold_2397_8
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

6398..7369
DNA (972bp) protein (324aa)
Quinolinate synthase A n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=NADA_THEYD
quinolinate synthetase A
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Meg22_810_Bin_76_scaffold_2397_9
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

7347..8180
DNA (834bp) protein (278aa)
aspartate dehydrogenase (EC:1.4.1.21)
Probable L-aspartate dehydrogenase id=2040249 bin=GWB2_CP_45_9 species=Methanosalsum zhilinae genus=Methanosalsum taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
Meg22_810_Bin_76_scaffold_2397_10
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

8207..8431
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=uncultured microorganism RepID=F8UI40_9ZZZZ
hypothetical protein
Tax=RBG_13_WOR_2_41_10_curated
Meg22_810_Bin_76_scaffold_2397_11
GWA2_OP3X_41_15_curated, OP3X, Bacteria

Not on your lists

8512..9735
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037CE8C8
succinyl-diaminopimelate desuccinylase
Tax=GWA2_OP3X_41_15_curated
Meg22_810_Bin_76_scaffold_2397_12
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

10300..13149
DNA (2850bp) protein (950aa)
UvrABC system protein A n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYI2_THEOJ
excinuclease ABC subunit A
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Meg22_810_Bin_76_scaffold_2397_13
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

Not on your lists

13130..15607
DNA (2478bp) protein (826aa)
Uncharacterized protein {ECO:0000313|EMBL:KJJ83296.1}; TaxID=1609969 species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus Omnitrophus sp. SKK-01.;"
TPR repeat-containing protein (Fragment) id=3003433 bin=GWF2_OP3_38_59 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
outer membrane assembly lipoprotein YfiO
Meg22_810_Bin_76_scaffold_2397_14
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

15776..16405
DNA (630bp) protein (210aa)
MotA/TolQ/ExbB proton channel family domain protein (Fragment) id=4208806 bin=GWA2_OP3_53_43 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
biopolymer transport membrane proton channel TolQ-like protein
Tax=RBG_13_OP3X_46_9_curated
Meg22_810_Bin_76_scaffold_2397_15
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

16416..16817
DNA (402bp) protein (134aa)
Biopolymer transport protein ExbD/TolR id=4547706 bin=GWC2_OP3-like_45_7 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
biopolymer transport protein, ExbD/TolR family
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Meg22_810_Bin_76_scaffold_2397_16
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

16818..17516
DNA (699bp) protein (233aa)
Tax=RBG_13_OP3X_46_9_curated
Meg22_810_Bin_76_scaffold_2397_17
unknown

Not on your lists

17624..17758
DNA (135bp) protein (45aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_2397_18
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

17775..17975
DNA (201bp) protein (67aa)
Putative uncharacterized protein id=4012480 bin=GWF2_OP3_43_52 species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
Tax=RBG_13_OP3X_46_9_curated
Meg22_810_Bin_76_scaffold_2397_19
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

17986..18255
DNA (270bp) protein (90aa)
Tax=CG_Omnitr_03
Meg22_810_Bin_76_scaffold_2397_20
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

18280..19179
DNA (900bp) protein (300aa)
Histone deacetylase superfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A43_SOLUE
histone deacetylase superfamily protein
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Meg22_810_Bin_76_scaffold_2397_21
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

19176..19577
DNA (402bp) protein (134aa)
hypothetical protein id=14425668 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
DNA ligase D-like 3'-phosphoesterase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Meg22_810_Bin_76_scaffold_2397_22
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

19714..20310
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00034631F1
nitroreductase
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Meg22_810_Bin_76_scaffold_2397_23
unknown

Not on your lists

20322..20777
DNA (456bp) protein (152aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_2397_24
unknown

Not on your lists

20774..21244
DNA (471bp) protein (157aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_2397_trna_1
unknown

Not on your lists

21370..21442
DNA (73bp)
transferRNA Ala
Meg22_810_Bin_76_scaffold_2397_25
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21649..22602
DNA (954bp) protein (318aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW96032.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Meg22_810_Bin_76_scaffold_2397_26
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

Not on your lists

22613..24097
DNA (1485bp) protein (495aa)
Dioxygenase {ECO:0000313|EMBL:KJJ85695.1}; TaxID=1609969 species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus Omnitrophus sp. SKK-01.;"
AMMECR1 domain protein id=4236868 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
AMMECR1 domain-containing protein
Meg22_810_Bin_76_scaffold_2397_27
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

24094..24822
DNA (729bp) protein (243aa)
Ribosomal RNA small subunit methyltransferase E id=4735704 bin=GWC2_OP3_44_8 species=Dorea longicatena genus=Dorea taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
Tax=RBG_13_OP3X_46_9_curated
Meg22_810_Bin_76_scaffold_2397_28
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

24824..26080
DNA (1257bp) protein (419aa)
RNA modification enzyme, MiaB family id=4236874 bin=GWF2_OP3_43_52 species=Caldicellulosiruptor saccharolyticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
MiaB-like tRNA modifying enzyme
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
Meg22_810_Bin_76_scaffold_2397_29
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

26155..26793
DNA (639bp) protein (213aa)
Putative uncharacterized protein id=2079763 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
putative membrane protein, required for colicin V production
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
Displaying items 1-30 of 39 in total

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