ggKbase home page

Meg22_810_Bin_76_scaffold_4687

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_810_Bin_76_scaffold_4687_1
unknown

Not on your lists

comp(3..110)
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_4687_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

456..797
-----------------
DNA (342bp)
protein (114aa)
regulatory protein ArsR id=14425116 bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
regulatory protein ArsR
Tax=CSP1_2_Dadabacteria
Meg22_810_Bin_76_scaffold_4687_3
Sulfurospirillum deleyianum, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

879..1100
-----------------
DNA (222bp)
protein (74aa)
DNA-binding protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B77EC8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ11234.1}; TaxID=525898 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175).;"
Meg22_810_Bin_76_scaffold_4687_4
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

1239..2957
-----------------
DNA (1719bp)
protein (573aa)
phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
hypothetical protein n=1 Tax=Salinicoccus albus RepID=UPI00037C3291
Tax=CG_Elusi_05
Meg22_810_Bin_76_scaffold_4687_5
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3009..3926)
-----------------
DNA (918bp)
protein (306aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=1872160 bin=GWD2_RBX1-related_39_127 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RBG_13_Bacteroidetes_42_15_curated
Meg22_810_Bin_76_scaffold_4687_6
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(3967..4308)
-----------------
DNA (342bp)
protein (114aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AND4_IGNAJ
hypothetical protein
Tax=CG_Elusi_05
Meg22_810_Bin_76_scaffold_4687_7
unknown

Not on your lists

comp(4340..4543)
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_4687_8

Not on your lists

comp(4544..5482)
-----------------
DNA (939bp)
protein (313aa)
quinolinate synthetase complex subunit A (EC:2.1.1.63)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000382E2CC
Marine sediment metagenome DNA, contig: S01H4_C03383 {ECO:0000313|EMBL:GAG55977.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_810_Bin_76_scaffold_4687_9
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5486..6535)
-----------------
DNA (1050bp)
protein (350aa)
hypothetical protein n=1 Tax=Latescibacteria bacterium SCGC AAA252-D10 RepID=UPI0003747810
hydrogenase expression/formation protein HypE
Tax=RBG_16_Gamma2_64_11_curated
Meg22_810_Bin_76_scaffold_4687_10
unknown

Not on your lists

comp(6610..6939)
-----------------
DNA (330bp)
protein (110aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_4687_11
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(7216..7665)
-----------------
DNA (450bp)
protein (150aa)
Universal stress protein Usp n=2 Tax=Geobacter metallireducens RepID=Q39PX1_GEOMG
usp-3; universal stress protein Usp
Tax=RBG_13_Nitrospirae_39_12_curated
Meg22_810_Bin_76_scaffold_4687_12
unknown

Not on your lists

comp(7662..7817)
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_4687_13
unknown

Not on your lists

8030..8341
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_4687_14
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

Not on your lists

8508..8774
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein id=8267250 bin=CD_OP8_4m species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
Meg22_810_Bin_76_scaffold_4687_15

Not on your lists

comp(8863..9696)
-----------------
DNA (834bp)
protein (278aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos33E1 RepID=Q64A31_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU83746.1}; TaxID=285377 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos33E1.;"
putative selenocysteine protein
Meg22_810_Bin_76_scaffold_4687_16
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9944..10906)
-----------------
DNA (963bp)
protein (321aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B408FA
hypothetical protein
Tax=GWA2_Deltaproteobacteria_54_12_curated
Meg22_810_Bin_76_scaffold_4687_17
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11009..13078)
-----------------
DNA (2070bp)
protein (690aa)
GTP-binding protein, HSR1-related n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I413_DESAP
HSR1-like GTP-binding protein
GTP-binding protein, HSR1-related {ECO:0000313|EMBL:ACA59777.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
Meg22_810_Bin_76_scaffold_4687_18

Not on your lists

comp(13071..14168)
-----------------
DNA (1098bp)
protein (366aa)
Marine sediment metagenome DNA, contig: S03H2_S11399 {ECO:0000313|EMBL:GAH63802.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DtxR family transcriptional regulator id=3393312 bin=GWC2_Ignavibacteria_56_12 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
mntH; putative manganese transport protein MntH
Meg22_810_Bin_76_scaffold_4687_19

Not on your lists

14639..15253
-----------------
DNA (615bp)
protein (205aa)
Protein containing Methyltransferase type 11 domain n=1 Tax=sediment metagenome RepID=D9PKM8_9ZZZZ
Marine sediment metagenome DNA, contig: S01H4_C01190 {ECO:0000313|EMBL:GAG64118.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
methyltransferase type 11
Meg22_810_Bin_76_scaffold_4687_20
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15282..17141
-----------------
DNA (1860bp)
protein (620aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002FEECFC
fadH; NADPH-dependent 2,4-dienoyl-CoA reductase
NADPH-dependent 2,4-dienoyl-CoA reductase {ECO:0000313|EMBL:AFH48841.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
Meg22_810_Bin_76_scaffold_4687_21

Not on your lists

17228..17950
-----------------
DNA (723bp)
protein (241aa)
hypothetical protein n=2 Tax=unclassified candidate division KSB1 RepID=UPI00035F0817
Putative uncharacterized protein {ECO:0000313|EMBL:AAU83306.1}; TaxID=285384 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos27E6.;"
permease
Meg22_810_Bin_76_scaffold_4687_22
unknown

Not on your lists

comp(18112..18321)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_4687_23
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

18721..19998
-----------------
DNA (1278bp)
protein (426aa)
Glycosyl transferase group 1 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYN9_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EHO40908.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
glycosyl transferase
Meg22_810_Bin_76_scaffold_4687_24
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

20025..20195
-----------------
DNA (171bp)
protein (57aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI00035CAAE0
Tax=RBG_13_Aminicenantes_59_9_curated
Meg22_810_Bin_76_scaffold_4687_25
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

20192..21427
-----------------
DNA (1236bp)
protein (412aa)
Glycosyl transferase group 1 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYP0_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EHO40909.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
group 1 glycosyl transferase
Meg22_810_Bin_76_scaffold_4687_26

Not on your lists

comp(21437..22336)
-----------------
DNA (900bp)
protein (300aa)
thiamine pyrophosphate protein domain protein TPP-binding protein; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] id=17039986 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
Uncharacterized protein {ECO:0000313|EMBL:KKM00287.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
thiamine pyrophosphate protein domain protein TPP-binding protein
Meg22_810_Bin_76_scaffold_4687_27

Not on your lists

comp(22333..23010)
-----------------
DNA (678bp)
protein (226aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM00286.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
2-oxoacid:ferredoxin oxidoreductase, alpha subunit id=17039987 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
pyruvate oxidoreductase subunit alpha
Meg22_810_Bin_76_scaffold_4687_28

Not on your lists

comp(23032..23487)
-----------------
DNA (456bp)
protein (152aa)
vorA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.7); K00186 2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.7] id=24393942 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
vorA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.7)
Uncharacterized protein {ECO:0000313|EMBL:KKM00286.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_810_Bin_76_scaffold_4687_29

Not on your lists

comp(23484..23783)
-----------------
DNA (300bp)
protein (100aa)
vorD; 2-ketoisovalerate ferredoxin oxidoreductase subunit delta (EC:1.2.7.7) id=17039988 bin=RBG_16_Aminicenantes_63_16_plus species=Thermococcus litoralis genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
vorD; 2-ketoisovalerate ferredoxin oxidoreductase subunit delta (EC:1.2.7.1)
Uncharacterized protein {ECO:0000313|EMBL:KKM00285.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_810_Bin_76_scaffold_4687_30
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(23795..24403)
-----------------
DNA (609bp)
protein (203aa)
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family id=24524211 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
Displaying items 1-30 of 31 in total

View Taxonomy