ggKbase home page

Meg22_810_Bin_76_scaffold_9368

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_810_Bin_76_scaffold_9368_1
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(92..280)
DNA (189bp) protein (63aa)
Lipoprotein signal peptidase n=1 Tax=uncultured bacterium RepID=K2B7W2_9BACT
lipoprotein signal peptidase
Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
Meg22_810_Bin_76_scaffold_9368_2
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

comp(455..880)
DNA (426bp) protein (142aa)
transcriptional regulator, TraR/DksA family id=17027 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
DksA; DnaK suppressor protein
Tax=BJP_IG2158_OD1_28_51
Meg22_810_Bin_76_scaffold_9368_3
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(946..5373)
DNA (4428bp) protein (1476aa)
FG-GAP repeat protein {ECO:0000313|EMBL:KKW15955.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
peptidase S8 and S53, subtilisin, kexin, sedolisin id=2169412 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
YD repeat-containing protein
Meg22_810_Bin_76_scaffold_9368_4
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

comp(5613..6890)
DNA (1278bp) protein (426aa)
Glutamate dehydrogenase {ECO:0000313|EMBL:KKW00682.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
Glutamate dehydrogenase id=5799766 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Meg22_810_Bin_76_scaffold_9368_5
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

comp(6905..7873)
DNA (969bp) protein (323aa)
hypothetical protein id=5801255 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
glucose-inhibited division protein A
Tax=BJP_IG2158_OD1_28_51
Meg22_810_Bin_76_scaffold_9368_6
R_OD1_Falkowbacteria_46_11b, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7882..8205)
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEB8_RHOMR
thioredoxin
Tax=RIFCSPLOWO2_02_FULL_OD1_Falkowbacteria_46_11b_curated
Meg22_810_Bin_76_scaffold_9368_7
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

comp(8225..8503)
DNA (279bp) protein (93aa)
Uncharacterized protein n=5 Tax=Pelosinus fermentans RepID=I8SDA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKW00680.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
hypothetical protein
Meg22_810_Bin_76_scaffold_9368_trna_4
unknown

Not on your lists

comp(8730..8803)
DNA (74bp)
transferRNA Ala
Meg22_810_Bin_76_scaffold_9368_8
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9329..9994)
DNA (666bp) protein (222aa)
Conserved TM helix repeat-containing protein id=1995445 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
Meg22_810_Bin_76_scaffold_9368_trna_3
unknown

Not on your lists

comp(10392..10464)
DNA (73bp)
transferRNA Ala
Meg22_810_Bin_76_scaffold_9368_trna_2
unknown

Not on your lists

comp(10801..10872)
DNA (72bp)
transferRNA Arg
Meg22_810_Bin_76_scaffold_9368_9
unknown

Not on your lists

comp(11407..11661)
DNA (255bp) protein (85aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_9368_10
R_OD1_Falkowbacteria_46_11b, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

11798..12193
DNA (396bp) protein (132aa)
cell shape determination protein CcmA n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B77A2F
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Falkowbacteria_46_11b_curated
Meg22_810_Bin_76_scaffold_9368_11
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

12216..12989
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EU49_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
Meg22_810_Bin_76_scaffold_9368_12
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

13108..15105
DNA (1998bp) protein (666aa)
Translation initiation factor IF-2 id=1816898 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
infB; translation initiation factor IF-2
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
Meg22_810_Bin_76_scaffold_9368_13
RHI_RIF_OD1_01_48_17, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

15127..15471
DNA (345bp) protein (115aa)
seg 78..90 id=96705 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
ribosome-binding factor A
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
Meg22_810_Bin_76_scaffold_9368_14
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

15508..16482
DNA (975bp) protein (325aa)
Exopolyphosphatase-like protein enzyme {ECO:0000313|EMBL:KKW00670.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
MgpA protein; K06881 id=54008 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
phosphoesterase domain-containing protein
Meg22_810_Bin_76_scaffold_9368_15
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16652..17275
DNA (624bp) protein (208aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Meg22_810_Bin_76_scaffold_9368_16
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

17691..18119
DNA (429bp) protein (143aa)
ATP-dependent Clp protease proteolytic subunit id=1816891 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Clp protease
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
Meg22_810_Bin_76_scaffold_9368_17
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

18270..19802
DNA (1533bp) protein (511aa)
Ribonuclease Y {ECO:0000313|EMBL:KKW00668.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
hypothetical protein id=5801618 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
HDIG/KH domain-containing protein
Meg22_810_Bin_76_scaffold_9368_18
R_OD1_Uhrbacteria_47_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

19792..20610
DNA (819bp) protein (273aa)
ymdB; hypothetical protein; K09769 hypothetical protein id=5098413 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
ABC superfamily ATP binding cassette transporter, binding protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_25_curated
Meg22_810_Bin_76_scaffold_9368_19
RHI_RIF_OD1_01_48_17, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

20654..20932
DNA (279bp) protein (93aa)
hypothetical protein id=5801620 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
histone family protein DNA-binding protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
Meg22_810_Bin_76_scaffold_9368_trna_1
unknown

Not on your lists

comp(21087..21159)
DNA (73bp)
transferRNA Ile
Meg22_810_Bin_76_scaffold_9368_20
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(21514..22527)
DNA (1014bp) protein (338aa)
id=1899114 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
Meg22_810_Bin_76_scaffold_9368_21
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

comp(22563..24404)
DNA (1842bp) protein (614aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000313|EMBL:KKW01226.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
hypothetical protein id=5801625 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Meg22_810_Bin_76_scaffold_9368_22
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(24564..25751)
DNA (1188bp) protein (396aa)
hypothetical protein id=5801626 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
30S ribosomal protein S1
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
Meg22_810_Bin_76_scaffold_9368_23
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

26024..27085
DNA (1062bp) protein (354aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
Meg22_810_Bin_76_scaffold_9368_24
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

27203..27838
DNA (636bp) protein (212aa)
Zn-dependent hydrolase of the beta-lactamase fold-like protein {ECO:0000313|EMBL:KKR05853.1}; TaxID=1618922 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein id=5801628 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Zn-dependent hydrolase of the beta-lactamase fold-like protein
Meg22_810_Bin_76_scaffold_9368_25
unknown

Not on your lists

27846..28268
DNA (423bp) protein (141aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_9368_26
RBG_13_OD1_Falkowbacteria_39_14_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


28276..30744
DNA (2469bp) protein (823aa)
DNA gyrase subunit A (EC:5.99.1.3)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI0003736713
Tax=RBG_13_OD1_Falkowbacteria_39_14_curated
Displaying items 1-30 of 44 in total

View Taxonomy