ggKbase home page

Meg22_810_Bin_76_scaffold_15318

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_810_Bin_76_scaffold_15318_1
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

1..150
-----------------
DNA (150bp)
protein (50aa)
Fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-biphosphate aldolase id=4287519 bin=GWF2_OP3_38_59 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Tax=RBG_13_OP3X_46_9_curated
Meg22_810_Bin_76_scaffold_15318_2
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

163..1143
-----------------
DNA (981bp)
protein (327aa)
alcohol dehydrogenase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B74ACC
theronine dehydrogenase-like Zn-dependent dehydrogenase
Tax=CG_Omnitr_03
Meg22_810_Bin_76_scaffold_15318_3

Not on your lists

1156..1497
-----------------
DNA (342bp)
protein (114aa)
Marine sediment metagenome DNA, contig: S03H2_S25128 {ECO:0000313|EMBL:GAH76702.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_810_Bin_76_scaffold_15318_4
unknown

Not on your lists

1794..1952
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_15318_5
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

1991..2308
-----------------
DNA (318bp)
protein (106aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00036E151F
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
Meg22_810_Bin_76_scaffold_15318_6

Not on your lists

2412..2795
-----------------
DNA (384bp)
protein (128aa)
Two component transcriptional regulator, winged helix family n=2 Tax=Thermoanaerobacter RepID=D3T3C4_THEIA
Marine sediment metagenome DNA, contig: S06H3_S07054 {ECO:0000313|EMBL:GAI25245.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
winged helix family two component transcriptional regulator
Meg22_810_Bin_76_scaffold_15318_7

Not on your lists

2894..3286
-----------------
DNA (393bp)
protein (131aa)
transcriptional regulator n=1 Tax=Paenibacillus RepID=UPI0002F9E1DE
Marine sediment metagenome DNA, contig: S06H3_S07054 {ECO:0000313|EMBL:GAI25245.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
winged helix family two component transcriptional regulator
Meg22_810_Bin_76_scaffold_15318_8

Not on your lists

comp(3915..4286)
-----------------
DNA (372bp)
protein (124aa)
Marine sediment metagenome DNA, contig: S01H1_L00247 {ECO:0000313|EMBL:GAF80668.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=1241215 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Meg22_810_Bin_76_scaffold_15318_9
unknown

Not on your lists

comp(4347..4796)
-----------------
DNA (450bp)
protein (150aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_15318_10
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

comp(4800..5303)
-----------------
DNA (504bp)
protein (168aa)
hypothetical protein; K09793 hypothetical protein id=14426326 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_13_OP3X_46_9_curated
Meg22_810_Bin_76_scaffold_15318_11
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

comp(5321..5827)
-----------------
DNA (507bp)
protein (169aa)
Tax=RBG_13_OP3X_46_9_curated
Meg22_810_Bin_76_scaffold_15318_12

Not on your lists

comp(5971..6132)
-----------------
DNA (162bp)
protein (54aa)
transmembrane_regions 4..21 id=128338 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
Uncharacterized protein {ECO:0000313|EMBL:EKD27749.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Meg22_810_Bin_76_scaffold_15318_13
Chelonia mydas, Chelonia, Testudines, Chordata, Metazoa

Not on your lists

comp(6188..7687)
-----------------
DNA (1500bp)
protein (500aa)
PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein 87-like n=1 Tax=Rattus norvegicus RepID=UPI0002687844
Uncharacterized protein {ECO:0000313|EMBL:EMP42701.1}; TaxID=8469 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia.;" source="Chelonia mydas (Green sea-turtle) (Chelonia agassizi).;"
GDSL-family lipase/acylhydrolase
Meg22_810_Bin_76_scaffold_15318_14
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(7850..8215)
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3W6_NITHN
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
Meg22_810_Bin_76_scaffold_15318_15
unknown

Not on your lists

comp(8276..8503)
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_15318_16
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

comp(8535..9017)
-----------------
DNA (483bp)
protein (161aa)
Tax=CG_Omnitr_06
Meg22_810_Bin_76_scaffold_15318_17
RIFOXYC2_FULL_WOR_2_45_15_curated, WOR-2, Bacteria

Not on your lists

comp(8981..9436)
-----------------
DNA (456bp)
protein (152aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWU7_9BACT
hypothetical protein
Tax=RIFOXYC2_FULL_WOR_2_45_15_curated
Meg22_810_Bin_76_scaffold_15318_18
unknown

Not on your lists

comp(9429..9536)
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_15318_19
R_WOR_2_52_10, WOR-2, Bacteria

Not on your lists

comp(9706..9906)
-----------------
DNA (201bp)
protein (67aa)
Cold-shock DNA-binding protein family id=4385688 bin=GWA2_OP3_53_43 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
cold-shock DNA-binding domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_52_10_curated
Meg22_810_Bin_76_scaffold_15318_20
R_Omnitrophica_50_24, Omnitrophica, Bacteria

Not on your lists

comp(10158..10412)
-----------------
DNA (255bp)
protein (85aa)
id=4243149 bin=GWC2_OP3-like_45_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_50_24_curated
Meg22_810_Bin_76_scaffold_15318_21
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(10435..10827)
-----------------
DNA (393bp)
protein (131aa)
Tax=CG_Elusi_05
Meg22_810_Bin_76_scaffold_15318_22

Not on your lists

comp(10829..11308)
-----------------
DNA (480bp)
protein (160aa)
Marine sediment metagenome DNA, contig: S01H1_S09917 {ECO:0000313|EMBL:GAG10832.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_810_Bin_76_scaffold_15318_23
unknown

Not on your lists

comp(11289..11585)
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_15318_24
unknown

Not on your lists

comp(11582..12037)
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

Meg22_810_Bin_76_scaffold_15318_25
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(12050..12640)
-----------------
DNA (591bp)
protein (197aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XXF1_9BACT
hypothetical protein
Tax=RBG_13_WOR_2_41_10_curated
Meg22_810_Bin_76_scaffold_15318_26
unknown

Not on your lists

comp(12645..12764)
-----------------
DNA (120bp)
protein (40aa)

This feature has no annotations

Displaying 26 items

View Taxonomy