ggKbase home page

Meg_22_1618_bin_98_scaffold_2616

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg_22_1618_bin_98_scaffold_2616_1

Not on your lists


1..474
DNA (474bp) protein (158aa)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:KHO51939.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO51939.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY id=5103653 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit E
Meg_22_1618_bin_98_scaffold_2616_2
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

476..658
DNA (183bp) protein (61aa)
Transcription elongation factor Spt4 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
DNA-directed RNA polymerase, subunit E
Meg_22_1618_bin_98_scaffold_2616_3
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

660..1016
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376F1AE
Tax=AR17
Meg_22_1618_bin_98_scaffold_2616_4
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

973..1167
DNA (195bp) protein (65aa)
30S ribosomal protein S27 n=1 Tax=Thermococcus zilligii RepID=UPI00029A74A2
30S ribosomal protein S27ae
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strain MM 739 / DSM 12597).;"
Meg_22_1618_bin_98_scaffold_2616_5
Hippea maritima, Hippea, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1169..2056)
DNA (888bp) protein (296aa)
Chaperone protein DnaJ n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LUD2_HIPMA
chaperone protein dnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=760142 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurellales; Desulfurellaceae; Hippea.;" source="Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2).;"
Meg_22_1618_bin_98_scaffold_2616_6
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2139..2963)
DNA (825bp) protein (275aa)
Lytic transglycosylase domain protein id=1981867 bin=GWB2_Geobacter-like_52_12 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
lytic transglycosylase catalytic subunit
Tax=CG_Desulfarul_01
Meg_22_1618_bin_98_scaffold_2616_7
unknown

Not on your lists

comp(2966..3988)
DNA (1023bp) protein (341aa)

This feature has no annotations

Meg_22_1618_bin_98_scaffold_2616_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4063..4911)
DNA (849bp) protein (283aa)
murQ; N-acetylmuramic acid-6-phosphate etherase (EC:4.2.-.-)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
N-acetylmuramic acid 6-phosphate etherase n=3 Tax=Clostridium botulinum RepID=MURQ_CLOB6
Meg_22_1618_bin_98_scaffold_2616_9
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4908..5921)
DNA (1014bp) protein (338aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).;"
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000362F389
Meg_22_1618_bin_98_scaffold_2616_trna_1
unknown

Not on your lists

6003..6086
DNA (84bp)
transferRNA Ser
Meg_22_1618_bin_98_scaffold_2616_trna_2
unknown

Not on your lists

6097..6183
DNA (87bp)
transferRNA Thr
Meg_22_1618_bin_98_scaffold_2616_10
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(6190..7950)
DNA (1761bp) protein (587aa)
Cl-channel voltage-gated family protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRD7_9BACT
voltage gated chloride channel family protein
Tax=CG_Arma_01
Meg_22_1618_bin_98_scaffold_2616_11
unknown

Not on your lists

8114..8854
DNA (741bp) protein (247aa)

This feature has no annotations

Meg_22_1618_bin_98_scaffold_2616_12
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

8854..9318
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003638522
hypothetical protein
Tax=AR18
Meg_22_1618_bin_98_scaffold_2616_13
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

9315..9842
DNA (528bp) protein (176aa)
NEQ238 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MR9_NANEQ id=5103447 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
Meg_22_1618_bin_98_scaffold_2616_14
unknown

Not on your lists

9869..10510
DNA (642bp) protein (214aa)

This feature has no annotations

Meg_22_1618_bin_98_scaffold_2616_15
unknown

Not on your lists

10558..11352
DNA (795bp) protein (265aa)

This feature has no annotations

Meg_22_1618_bin_98_scaffold_2616_16
R_WWE3_53_10, WWE3, Bacteria

Not on your lists

11390..11683
DNA (294bp) protein (98aa)
id=3506553 bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Tax=RIFCSPLOWO2_02_FULL_WWE3_53_10_curated
Meg_22_1618_bin_98_scaffold_2616_17
unknown

Not on your lists

comp(11673..12065)
DNA (393bp) protein (131aa)

This feature has no annotations

Meg_22_1618_bin_98_scaffold_2616_18
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12082..12396)
DNA (315bp) protein (105aa)
Transcription-associated protein TFIIS n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VZ68_9EURY id=5103330 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription-associated protein TFIIS
Tax=AR20
Meg_22_1618_bin_98_scaffold_2616_19

Not on your lists

comp(12398..12964)
DNA (567bp) protein (189aa)
Marine sediment metagenome DNA, contig: S12H4_L00950 {ECO:0000313|EMBL:GAI82642.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Peptidase S26B, eukaryotic signal peptidase id=5043727 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Meg_22_1618_bin_98_scaffold_2616_20
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(12998..13582)
DNA (585bp) protein (195aa)
Protein J422_02599 n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6UVF4_9EURY
hypothetical protein
Tax=CG_Micra_05
Meg_22_1618_bin_98_scaffold_2616_21
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(13579..13854)
DNA (276bp) protein (92aa)
DNA-directed RNA polymerase subunit L n=2 Tax=Methanobacterium RepID=K6SZJ9_9EURY id=5103326 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit L
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg_22_1618_bin_98_scaffold_2616_22
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13875..14498)
DNA (624bp) protein (208aa)
RNA methylase; K07579 putative methylase id=5044974 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
methyltransferase
Tax=AR17
Meg_22_1618_bin_98_scaffold_2616_23
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14531..15391)
DNA (861bp) protein (287aa)
16S rRNA (guanine(1405)-N(7))-methyltransferase id=5044147 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR17
Meg_22_1618_bin_98_scaffold_2616_24
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(15336..15878)
DNA (543bp) protein (181aa)
KH domain protein; K06961 ribosomal RNA assembly protein id=5048469 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=AR17
Meg_22_1618_bin_98_scaffold_2616_25

Not on your lists

comp(15880..16200)
DNA (321bp) protein (107aa)
translation initiation factor eIF-1A; K03236 translation initiation factor 1A id=5048850 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Translation initiation factor 1A
Meg_22_1618_bin_98_scaffold_2616_26

Not on your lists

comp(16228..16548)
DNA (321bp) protein (107aa)
id=5048851 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53920.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
Meg_22_1618_bin_98_scaffold_2616_27
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16550..16840)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8A2_METEZ id=5103228 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
Meg_22_1618_bin_98_scaffold_2616_28
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16842..17249)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003671EC4
Translation initiation factor 2 subunit beta
Tax=AR17
Displaying items 1-30 of 34 in total

View Taxonomy