ggKbase home page

Meg_22_1618_bin_98_scaffold_5650

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg_22_1618_bin_98_scaffold_5650_1
unknown

Not on your lists

comp(1..384)
DNA (384bp) protein (128aa)

This feature has no annotations

Meg_22_1618_bin_98_scaffold_5650_2
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

483..3557
DNA (3075bp) protein (1025aa)
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
isoleucyl-tRNA synthetase
Tax=CG_Pacearch_04
Meg_22_1618_bin_98_scaffold_5650_3

Not on your lists

3616..3873
DNA (258bp) protein (86aa)
Peptidase U32 n=1 Tax=uncultured organism RepID=M1PQS3_9ZZZZ
Marine sediment metagenome DNA, contig: S01H4_C01490 {ECO:0000313|EMBL:GAG69854.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Translation elongation factor-like protein
Meg_22_1618_bin_98_scaffold_5650_4
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

3905..5518
DNA (1614bp) protein (538aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048845 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA topoisomerase VI, subunit B
Tax=AR18
Meg_22_1618_bin_98_scaffold_5650_5
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

5481..6575
DNA (1095bp) protein (365aa)
DNA topoisomerase (ATP-hydrolyzing) n=4 Tax=Candidatus Parvarchaeum RepID=D2EGK9_9EURY id=5103234 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA topoisomerase ATP-hydrolyzing
Tax=AR20
Meg_22_1618_bin_98_scaffold_5650_trna_1
unknown

Not on your lists

comp(6577..6661)
DNA (85bp)
transferRNA Ser
Meg_22_1618_bin_98_scaffold_5650_6

Not on your lists

comp(6711..7052)
DNA (342bp) protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM17552.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=2858520 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Meg_22_1618_bin_98_scaffold_5650_7
unknown

Not on your lists

comp(7272..7832)
DNA (561bp) protein (187aa)

This feature has no annotations

Meg_22_1618_bin_98_scaffold_5650_8
GWC2_OD1_43_8, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

8615..8833
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=2 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSF2_9BACT id=138122 bin=ACD9 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKT20265.1}; TaxID=1618656 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWC2_43_8.;"
hypothetical protein
Meg_22_1618_bin_98_scaffold_5650_9

Not on your lists

8860..9177
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJD2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKT29217.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
hypothetical protein
Meg_22_1618_bin_98_scaffold_5650_10
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9226..10224
DNA (999bp) protein (333aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AKB33552.1}; EC=4.2.1.46 {ECO:0000313|EMBL:AKB33552.1};; TaxID=1434119 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae HI350.;"
rfbB-1; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7G2_UNCMA
Meg_22_1618_bin_98_scaffold_5650_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10208..11251)
DNA (1044bp) protein (348aa)
Pyruvate formate lyase activating like protein id=2314584 bin=GWA2_OP3_52_12 species=Thermococcus sibiricus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
radical SAM domain-containing protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
Meg_22_1618_bin_98_scaffold_5650_12

Not on your lists

comp(11230..11739)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-F05 RepID=UPI00037A1F96
Marine sediment metagenome DNA, contig: S03H2_L03025 {ECO:0000313|EMBL:GAH36641.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Meg_22_1618_bin_98_scaffold_5650_13
unknown

Not on your lists

11953..12573
DNA (621bp) protein (207aa)

This feature has no annotations

Meg_22_1618_bin_98_scaffold_5650_14
Caldicellulosiruptor obsidiansis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12599..13381
DNA (783bp) protein (261aa)
Nucleotidyl transferase n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TGU2_CALOO
nucleotidyltransferase
Nucleotidyl transferase {ECO:0000313|EMBL:ADL41428.1}; TaxID=608506 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47).;"
Meg_22_1618_bin_98_scaffold_5650_15
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13378..14355
DNA (978bp) protein (326aa)
galE; UDP-glucose 4-epimerase GalE (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7AQU4_THEM3
Uncharacterized protein {ECO:0000313|EMBL:KGG79639.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
Meg_22_1618_bin_98_scaffold_5650_16
Methanococcus aeolicus, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(14342..14641)
DNA (300bp) protein (100aa)
PHP domain protein n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=A6UUR7_META3
phosphotransferase domain-containing protein
PHP domain protein {ECO:0000313|EMBL:ABR56239.1}; TaxID=419665 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280).;"
Displaying 17 items

View Taxonomy