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Ig5770_scaffold_3133

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_3133_1
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(1..903)
DNA (903bp) protein (301aa)
Tax=CG_Aenigma_01
Ig5770_scaffold_3133_2

Not on your lists

1079..1243
DNA (165bp) protein (55aa)
Putative transposase n=1 Tax=uncultured archaeon RepID=D1JHE4_9ARCH
Putative transposase {ECO:0000313|EMBL:CBH37952.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Ig5770_scaffold_3133_3
unknown

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1366..1593
DNA (228bp) protein (76aa)

This feature has no annotations

Ig5770_scaffold_3133_4
unknown

Not on your lists

1612..1968
DNA (357bp) protein (119aa)

This feature has no annotations

Ig5770_scaffold_3133_5
unknown

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1989..2129
DNA (141bp) protein (47aa)

This feature has no annotations

Ig5770_scaffold_3133_6
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2422..3831)
DNA (1410bp) protein (470aa)
Amino acid permease n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BUD9_METCG id=5103485 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Amino acid permease
Tax=AR20
Ig5770_scaffold_3133_7
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

4016..4852
DNA (837bp) protein (279aa)
TrkA-N domain protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8C9_THEID
TrkA-N domain-containing protein
Tax=CG_Micra_04
Ig5770_scaffold_3133_8
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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4868..5569
DNA (702bp) protein (234aa)
putative type II restriction enzyme (EC:3.1.21.4)
Type II restriction enzyme DdeI (Endonuclease DdeI) (R.DdeI) id=1251427 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
Ig5770_scaffold_3133_9
unknown

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comp(5558..5758)
DNA (201bp) protein (67aa)

This feature has no annotations

Ig5770_scaffold_3133_10
Candidatus Methylopumilus planktonicus, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5761..6600)
DNA (840bp) protein (280aa)
Restriction endonuclease, type II, Bpu10I n=1 Tax=Erwinia tracheiphila PSU-1 RepID=R9NM41_9ENTR
Restriction endonuclease {ECO:0000313|EMBL:CEZ19395.1}; TaxID=1581557 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium MMS-2-53.;"
restriction endonuclease
Ig5770_scaffold_3133_11
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(6602..6877)
DNA (276bp) protein (92aa)
methyltransferase (EC:2.1.1.-)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Methyltransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0X3_ANATU
Ig5770_scaffold_3133_12
candidate division Zixibacteria, Bacteria

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comp(6874..7704)
DNA (831bp) protein (277aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
DNA methylase N-4/N-6 domain-containing protein id=1251426 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
DNA methylase N-4/N-6 domain-containing protein
Ig5770_scaffold_3133_13
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7694..7852)
DNA (159bp) protein (53aa)
id=5045969 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
Ig5770_scaffold_3133_14
RBG_13_WWE3_37_7_curated, WWE3, Bacteria

Not on your lists

comp(7957..8295)
DNA (339bp) protein (113aa)
Tax=RBG_13_WWE3_37_7_curated
Ig5770_scaffold_3133_15
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

8463..8624
DNA (162bp) protein (54aa)
Tax=CG_Aenigma_01
Ig5770_scaffold_3133_16
Methanocaldococcus sp. JH146, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

8611..9408
DNA (798bp) protein (266aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1301915 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. JH146.;"
DNA methylase N-4/N-6 domain protein n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P832_METFA
DNA methylase N-4/N-6 domain-containing protein
Ig5770_scaffold_3133_17
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

comp(9409..9630)
DNA (222bp) protein (74aa)
R.RsaI endonuclease n=1 Tax=Rhodobacter sphaeroides RepID=Q6SA27_RHOSH
R.RsaI endonuclease {ECO:0000313|EMBL:KKW05714.1}; TaxID=1618342 species="Bacteria; candidate division CPR1.;" source="candidate division CPR1 bacterium GW2011_GWC1_49_13.;"
Ig5770_scaffold_3133_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9904..10890
DNA (987bp) protein (329aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Protease HtpX homolog id=2559556 bin=GWC1_Spirochaetes_27_15 species=Methanobrevibacter ruminantium genus=Methanobrevibacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
htpX; heat shock protein
Ig5770_scaffold_3133_19
unknown

Not on your lists

comp(10926..11609)
DNA (684bp) protein (228aa)

This feature has no annotations

Ig5770_scaffold_3133_20
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(11653..12315)
DNA (663bp) protein (221aa)
endonuclease III (EC:4.2.99.18)
Endonuclease III n=3 Tax=Thermotoga RepID=A5IK50_THEP1
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_3133_21
unknown

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12366..12506
DNA (141bp) protein (47aa)

This feature has no annotations

Ig5770_scaffold_3133_22
unknown

Not on your lists

12532..12738
DNA (207bp) protein (69aa)

This feature has no annotations

Ig5770_scaffold_3133_23
unknown

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12728..12916
DNA (189bp) protein (63aa)

This feature has no annotations

Ig5770_scaffold_3133_24

Not on your lists

13054..14763
DNA (1710bp) protein (570aa)
ATP dependent helicase, Lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5047659 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
ATP-dependent helicase Lhr and Lhr-like protein helicase {ECO:0000313|EMBL:KHO47399.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO47399.1};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
Lhr-like helicase (EC:3.6.1.-)
Ig5770_scaffold_3133_25
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

14858..15901
DNA (1044bp) protein (348aa)
ATP dependent helicase, Lhr family id=3895731 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Putative ski2-type helicase
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_3133_26
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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15915..17363
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Brachyspira innocens RepID=UPI00036C19DB
DNA methylase N-4/N-6 domain-containing protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Ig5770_scaffold_3133_27
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

17360..18070
DNA (711bp) protein (237aa)
type II restriction enzyme MjaVIP (EC:3.1.21.4)
Putative type II restriction enzyme MjaVIP n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK13_THEYD
Tax=RBG_13_Pacearchaeota_36_9_curated
Ig5770_scaffold_3133_28
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

18054..18743
DNA (690bp) protein (230aa)
DNA methylase domain protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK12_THEYD
DNA methylase/Development and cell death domain
Tax=RBG_13_Pacearchaeota_36_9_curated
Ig5770_scaffold_3133_29
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

18746..20290
DNA (1545bp) protein (515aa)
DNA polymerase (EC:2.7.7.7)
DNA polymerase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YFV5_THEYD
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_3133_30
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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20429..21070
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LNT1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB66269.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-plasma.;"
hypothetical protein
Displaying items 1-30 of 50 in total

View Taxonomy