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ERMGT100_2_curated_scaffold_9

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Displaying items 211-221 of 221 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_9_211
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(268841..270037)
-----------------
DNA (1197bp)
protein (399aa)
hypothetical protein; K02004 putative ABC transport system permease protein id=24463454 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfovibrio sp. FW1012B genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
MacB-like periplasmic core domain protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_212
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(270045..270719)
-----------------
DNA (675bp)
protein (225aa)
ABC transporter-like protein id=24463453 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter-like protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_213
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(270771..271946)
-----------------
DNA (1176bp)
protein (392aa)
RND family efflux transporter, MFP subunit id=24463452 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Xanthomonas axonopodis genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
RND family efflux transporter MFP subunit
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_214
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

272126..272365
-----------------
DNA (240bp)
protein (80aa)
4Fe-4S ferredoxin id=24463451 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
4Fe-4S ferredoxin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_215
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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272373..272942
-----------------
DNA (570bp)
protein (190aa)
metal dependent phosphohydrolase id=24463450 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
metal dependent phosphohydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_216
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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272958..273506
-----------------
DNA (549bp)
protein (183aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EM69_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85782.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
ERMGT100_2_curated_scaffold_9_217
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(273511..274104)
-----------------
DNA (594bp)
protein (198aa)
High-affinity nickel-transporter n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D826_9BACT
high-affinity nickel-transporter
High-affinity nickel-transporter {ECO:0000313|EMBL:AHG88793.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMGT100_2_curated_scaffold_9_218
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(274170..277457)
-----------------
DNA (3288bp)
protein (1096aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III catalytic subunit, DnaE type n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RHB7_MOOTA id=5223182 bin=16ft_combo_ws3_JS1 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_219
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(277720..278391)
-----------------
DNA (672bp)
protein (224aa)
id=5223181 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_220
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(278418..279641)
-----------------
DNA (1224bp)
protein (408aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z9H3_9BACT id=5223180 bin=16ft_combo_ws3_JS1 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_221
unknown

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comp(279641..279721)
-----------------
DNA (81bp)
protein (27aa)

This feature has no annotations

Displaying items 211-221 of 221 in total

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