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ERMGT100_2_curated_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 221 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_9_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1..744)
-----------------
DNA (744bp)
protein (248aa)
NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QXY5_ISOPI
NADH/ubiquinone/plastoquinone
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMGT100_2_curated_scaffold_9_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(791..1495)
-----------------
DNA (705bp)
protein (235aa)
PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBE1_GEOUR
putative PTS IIA-like nitrogen-regulatory protein PtsN
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMGT100_2_curated_scaffold_9_3
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

comp(1718..2482)
-----------------
DNA (765bp)
protein (255aa)
OmpA/MotB domain protein id=1915203 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
OmpA/MotB domain-containing protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
ERMGT100_2_curated_scaffold_9_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

2926..5664
-----------------
DNA (2739bp)
protein (913aa)
hypothetical protein id=24475677 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

5844..6401
-----------------
DNA (558bp)
protein (186aa)
efp; translation elongation factor P; K02356 elongation factor P id=24475676 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
efp; translation elongation factor P
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_6
unknown

Not on your lists

6527..6655
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_9_7
unknown

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6652..6744
-----------------
DNA (93bp)
protein (31aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_9_8
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

6741..8495
-----------------
DNA (1755bp)
protein (585aa)
kdpA; high-affinity potassium transport system P-type ATPase, , A chain (EC:3.6.3.9)
Potassium-transporting ATPase A chain n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJC7_9BACT
Tax=RBG_16_Chloroflexi_54_18_curated
ERMGT100_2_curated_scaffold_9_9
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

8492..10561
-----------------
DNA (2070bp)
protein (690aa)
potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNF1_SORCE
Tax=RBG_13_Acidobacteria_68_16_curated
ERMGT100_2_curated_scaffold_9_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10576..11166
-----------------
DNA (591bp)
protein (197aa)
kdpC; potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=ATKC_METCA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ERMGT100_2_curated_scaffold_9_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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11216..13924
-----------------
DNA (2709bp)
protein (903aa)
kdpD; sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation (EC:2.7.1.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJR3_9BACT
ERMGT100_2_curated_scaffold_9_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13921..14628
-----------------
DNA (708bp)
protein (236aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXU8_HERA2
two component transcriptional regulator
Tax=GWA2_Rokubacteria_73_35_curated
ERMGT100_2_curated_scaffold_9_13
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

14653..14991
-----------------
DNA (339bp)
protein (113aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI0003608486
hypothetical protein
Tax=RBG_13_Chloroflexi_56_8_curated
ERMGT100_2_curated_scaffold_9_14
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14964..16100)
-----------------
DNA (1137bp)
protein (379aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NBZ7_DESAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB08074.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
ERMGT100_2_curated_scaffold_9_15
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16100..18691)
-----------------
DNA (2592bp)
protein (864aa)
hypothetical protein id=14430697 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
ERMGT100_2_curated_scaffold_9_16
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18688..19350)
-----------------
DNA (663bp)
protein (221aa)
ABC-type antimicrobial peptide transport system, ATPase component n=4 Tax=Mycobacterium avium RepID=F7P5N9_MYCPC
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETB08377.1}; TaxID=1391998 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. paratuberculosis 08-8281.;"
ABC transporter ATP-binding protein
ERMGT100_2_curated_scaffold_9_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(19389..20426)
-----------------
DNA (1038bp)
protein (346aa)
Transcription termination factor Rho n=3 Tax=Halomonas RepID=G4F250_9GAMM id=5224582 bin=16ft_combo_ws3_JS1 species=unknown genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
transcription termination factor Rho
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(20885..21427)
-----------------
DNA (543bp)
protein (181aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SL45_THEM7 id=5224583 bin=16ft_combo_ws3_JS1 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ATP/cobalamin adenosyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

21519..24224
-----------------
DNA (2706bp)
protein (902aa)
Transcription elongation factor GreA n=2 Tax=Azospirillum lipoferum RepID=D3NR70_AZOS1 id=5224584 bin=16ft_combo_ws3_JS1 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
greA; transcription elongation factor
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

24618..25304
-----------------
DNA (687bp)
protein (229aa)
tRNA synthetase subunit beta id=24507482 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
B3/4 domain protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_21
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

25457..26005
-----------------
DNA (549bp)
protein (183aa)
alias=16ft_combo_ws3_scaffold_2431_20 id=24507481 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_22
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

26014..26580
-----------------
DNA (567bp)
protein (189aa)
alias=16ft_combo_ws3_scaffold_2431_21 id=24507480 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_23
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(26644..28410)
-----------------
DNA (1767bp)
protein (589aa)
putative NAD+ synthase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] id=24507479 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
NAD+ synthase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(28887..30182)
-----------------
DNA (1296bp)
protein (432aa)
hypothetical protein id=24507478 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Methanosarcina mazei genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_25
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(30179..31105)
-----------------
DNA (927bp)
protein (309aa)
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein id=24507477 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter-like protein
Tax=RBG_13_Chloroflexi_48_10_curated
ERMGT100_2_curated_scaffold_9_26
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

31414..32697
-----------------
DNA (1284bp)
protein (428aa)
Putative uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6N9_NIAKG id=5223472 bin=16ft_combo_ws3_JS1 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_27
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

32771..33268
-----------------
DNA (498bp)
protein (166aa)
RNA-binding protein containing a PIN domain id=24507475 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_28
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(33324..34268)
-----------------
DNA (945bp)
protein (315aa)
alias=16ft_combo_ws3_scaffold_1271_4 id=24507474 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_29
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(34477..35268)
-----------------
DNA (792bp)
protein (264aa)
hypothetical protein id=24507473 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_30
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

35455..36921
-----------------
DNA (1467bp)
protein (489aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS43_9BACT id=5223476 bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 1-30 of 221 in total

View Taxonomy