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ERMGT100_2_curated_scaffold_23

Search features with annotation key words

Displaying items 31-60 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_23_31
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(50602..54429)
-----------------
DNA (3828bp)
protein (1276aa)
hypothetical protein id=24578851 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Ig domain-containing protein group 2 domain-containing protein
Tax=RBG_16_Acidobacteria_64_8_curated
ERMGT100_2_curated_scaffold_23_32
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54589..56403)
-----------------
DNA (1815bp)
protein (605aa)
Nudix hydrolase 3 protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TUT2_9DELT
Nudix hydrolase 3 protein {ECO:0000313|EMBL:ERK89224.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
hypothetical protein
ERMGT100_2_curated_scaffold_23_33
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(56370..57524)
-----------------
DNA (1155bp)
protein (385aa)
menaquinone biosynthesis protein, family id=24472243 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
radical SAM protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_34
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

57829..58866
-----------------
DNA (1038bp)
protein (346aa)
alias=16ft_combo_ws3_scaffold_1271_4 id=24507474 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_35
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

59062..59982
-----------------
DNA (921bp)
protein (307aa)
Uncharacterized protein n=2 Tax=Leptospira RepID=I0XPQ6_9LEPT id=5225465 bin=16ft_combo_ws3_JS1 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_36
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(60097..62760)
-----------------
DNA (2664bp)
protein (888aa)
Putative membrane associated hydrolase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A376_MELRP id=5223974 bin=16ft_combo_ws3_JS1 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
membrane associated hydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_37
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

62943..64952
-----------------
DNA (2010bp)
protein (670aa)
Kef-type K+ transport system NAD-binding protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family id=24522226 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Kef-type K+ transport system NAD-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_38
candidate division Zixibacteria, Bacteria

Not on your lists

comp(64969..67362)
-----------------
DNA (2394bp)
protein (798aa)
PAS sensor protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LG56_9BACT
PAS sensor protein {ECO:0000313|EMBL:EQB63218.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
PAS/PAC sensor hybrid histidine kinase
ERMGT100_2_curated_scaffold_23_39
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(67369..67839)
-----------------
DNA (471bp)
protein (157aa)
GAF sensor protein; K07170 GAF domain-containing protein id=1250354 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
putative GAF sensor protein
Tax=RBG_16_Zixibacteria_50_21_curated
ERMGT100_2_curated_scaffold_23_40
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

68029..69111
-----------------
DNA (1083bp)
protein (361aa)
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1YHK2_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ERI40859.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
penicillin-binding protein
ERMGT100_2_curated_scaffold_23_41
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(69258..70100)
-----------------
DNA (843bp)
protein (281aa)
ABC-3 protein id=4978629 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ABC-3 protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
ERMGT100_2_curated_scaffold_23_42
GWB2_Elusimicrobia_63_22_curated, Elusimicrobia, Bacteria

Not on your lists

comp(70111..71013)
-----------------
DNA (903bp)
protein (301aa)
Periplasmic solute binding protein id=1924259 bin=GWB2_Elusimicrobium_63_22 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
periplasmic solute binding protein
Tax=GWB2_Elusimicrobia_63_22_curated
ERMGT100_2_curated_scaffold_23_43
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(71022..72155)
-----------------
DNA (1134bp)
protein (378aa)
Putative uncharacterized protein id=3318507 bin=GWF2_Ignavibacteria_35_20 species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWA2_Ignavibacteria_54_16_curated
ERMGT100_2_curated_scaffold_23_44
unknown

Not on your lists

comp(72274..72564)
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_23_45
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(72640..74364)
-----------------
DNA (1725bp)
protein (575aa)
Erythromycin esterase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4M5_MYXSD
erythromycin esterase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMGT100_2_curated_scaffold_23_46
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(74374..76167)
-----------------
DNA (1794bp)
protein (598aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1P3_9BACT id=5223978 bin=16ft_combo_ws3_JS1 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
UbiD family decarboxylase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_47
unknown

Not on your lists

76295..76813
-----------------
DNA (519bp)
protein (173aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_23_48
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76810..77499
-----------------
DNA (690bp)
protein (230aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y3D8_SORCE
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT100_2_curated_scaffold_23_49
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77501..78298
-----------------
DNA (798bp)
protein (266aa)
hypothetical protein n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255E1AA
putative methyltransferase, S-adenosyl-L-methionine (SAM)-MTase protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT100_2_curated_scaffold_23_50
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(78304..79287)
-----------------
DNA (984bp)
protein (328aa)
alias=16ft_combo_ws3_scaffold_6917_2 id=24472253 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_51
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(79464..80018)
-----------------
DNA (555bp)
protein (185aa)
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC:4.1.1.-) id=24561324 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC:4.1.1.-)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_52
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(80056..82716)
-----------------
DNA (2661bp)
protein (887aa)
Serine/threonine protein kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TY9_SOLUE
serine/threonine protein kinase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
ERMGT100_2_curated_scaffold_23_53
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(83120..84007)
-----------------
DNA (888bp)
protein (296aa)
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDV9_ARCPA id=5223980 bin=16ft_combo_ws3_JS1 species=Archaeoglobus profundus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
4-hydroxybenzoate polyprenyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_54
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(84024..84698)
-----------------
DNA (675bp)
protein (225aa)
Uncharacterized protein n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZJ13_SHEVD id=5224752 bin=16ft_combo_ws3_JS1 species=Shewanella violacea genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_55
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(84771..84935)
-----------------
DNA (165bp)
protein (55aa)
Putative uncharacterized protein n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QQR0_ARTGO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB15161.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
hypothetical protein
ERMGT100_2_curated_scaffold_23_56
unknown

Not on your lists

comp(84874..85158)
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_23_57
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

85297..87351
-----------------
DNA (2055bp)
protein (685aa)
TonB-dependent outer membrane transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5X3_GEMAT
TonB-dependent outer membrane transport protein
TonB-dependent outer membrane transport protein {ECO:0000313|EMBL:BAH37633.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
ERMGT100_2_curated_scaffold_23_58
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(87376..87975)
-----------------
DNA (600bp)
protein (200aa)
id=5223713 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_59
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(88114..88767)
-----------------
DNA (654bp)
protein (218aa)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_60
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(88764..90836)
-----------------
DNA (2073bp)
protein (691aa)
Discoidin domain protein n=1 Tax=Patulibacter sp. I11 RepID=H0E870_9ACTN id=5225488 bin=16ft_combo_ws3_JS1 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 31-60 of 120 in total

View Taxonomy