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ERMGT100_2_curated_scaffold_23

Search features with annotation key words

Displaying items 91-120 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_23_91
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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120454..121791
-----------------
DNA (1338bp)
protein (446aa)
Major Facilitator Superfamily transporter n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A5A6_DEIPD
Major Facilitator Superfamily transporter {ECO:0000313|EMBL:AFZ69068.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
arabinose efflux permease family protein
ERMGT100_2_curated_scaffold_23_92
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

121788..122153
-----------------
DNA (366bp)
protein (122aa)
hypothetical protein id=24486222 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_93
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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122170..122934
-----------------
DNA (765bp)
protein (255aa)
hypothetical protein id=24486220 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_94
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(122945..123412)
-----------------
DNA (468bp)
protein (156aa)
AraC family transcriptional regulator; K13653 AraC family transcriptional regulator id=7716642 bin=BACIGN_2 species=Mesorhizobium opportunistum genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
putative transcriptional regulator, AraC family
Putative transcriptional regulator, AraC family {ECO:0000313|EMBL:AHK42490.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
ERMGT100_2_curated_scaffold_23_95
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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123504..124193
-----------------
DNA (690bp)
protein (230aa)
7-carboxy-7-deazaguanine synthase n=2 Tax=Novosphingobium RepID=F6IMW3_9SPHN id=5224014 bin=16ft_combo_ws3_JS1 species=unknown genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
coenzyme PQQ synthesis protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_96
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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124195..124896
-----------------
DNA (702bp)
protein (234aa)
7-cyano-7-deazaguanine synthase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UH29_MYXSD id=5224015 bin=16ft_combo_ws3_JS1 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
exsB protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_97
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

124893..125258
-----------------
DNA (366bp)
protein (122aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LW73_HALO1 id=5224016 bin=16ft_combo_ws3_JS1 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative 6-pyruvoyl tetrahydrobiopterin synthase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_98
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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125408..126328
-----------------
DNA (921bp)
protein (307aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN20_9BACT id=5224017 bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_99
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(126339..128513)
-----------------
DNA (2175bp)
protein (725aa)
Na-Ca exchanger/integrin-beta4 n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q10W91_TRIEI id=5224902 bin=16ft_combo_ws3_JS1 species=Trichodesmium erythraeum genus=Trichodesmium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Integrins subunit alpha
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_100
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

128631..130445
-----------------
DNA (1815bp)
protein (605aa)
Penicillin-binding protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FM61_9BACT id=5225776 bin=16ft_combo_ws3_JS1 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycosyl transferase family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_101
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

130462..132210
-----------------
DNA (1749bp)
protein (583aa)
id=5223441 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
PEP-CTERM system TPR-repeat lipoprotein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_102
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(132207..132635)
-----------------
DNA (429bp)
protein (143aa)
Putative uncharacterized protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QZB9_CHLT3
Uncharacterized protein {ECO:0000313|EMBL:KHD77508.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
ERMGT100_2_curated_scaffold_23_103
RBG_13_RIF08_66_14_curated, RIF8, Bacteria

Not on your lists

comp(132632..134311)
-----------------
DNA (1680bp)
protein (560aa)
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase id=4618156 bin=GWC2_Elusimicrobia_64_44 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Tax=RBG_13_RIF08_66_14_curated
ERMGT100_2_curated_scaffold_23_104
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

134433..134903
-----------------
DNA (471bp)
protein (157aa)
id=5225774 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_105
unknown

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134900..135703
-----------------
DNA (804bp)
protein (268aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_23_106
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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135741..138398
-----------------
DNA (2658bp)
protein (886aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ43_9BACT id=5225773 bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_107
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

138561..139055
-----------------
DNA (495bp)
protein (165aa)
Arginine repressor n=1 Tax=Bacillus tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WV95_BACT2 id=5225770 bin=16ft_combo_ws3_JS1 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
arginine repressor ArgR
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_108
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

139052..140125
-----------------
DNA (1074bp)
protein (358aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Streptomyces somaliensis DSM 40738 RepID=UPI00029AF113 id=5225769 bin=16ft_combo_ws3_JS1 species=Streptomyces somaliensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_109
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

140137..140964
-----------------
DNA (828bp)
protein (276aa)
Uncharacterized protein n=4 Tax=Panicoideae RepID=K3Y8J2_SETIT id=5225768 bin=16ft_combo_ws3_JS1 species=unknown genus=unknown taxon_order=Poales taxon_class=Liliopsida phylum=Streptophyta tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
argB: acetylglutamate kinase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_110
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

140961..142241
-----------------
DNA (1281bp)
protein (427aa)
Acetylornithine aminotransferase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9D7_AMMDK id=5225767 bin=16ft_combo_ws3_JS1 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acetylornithine and succinylornithine aminotransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_111
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

142238..143479
-----------------
DNA (1242bp)
protein (414aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKP6_9CHLR id=5225766 bin=16ft_combo_ws3_JS1 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_112
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

143493..145544
-----------------
DNA (2052bp)
protein (684aa)
N-acetylglutamate synthase ;argininosuccinate lyase (EC:2.3.1.1 4.3.2.1)
Argininosuccinate lyase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=ARLY_ROSCS id=5225765 bin=16ft_combo_ws3_JS1 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_113
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

145556..146557
-----------------
DNA (1002bp)
protein (334aa)
Ornithine carbamoyltransferase, catabolic n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3ECP0_CHLL2 id=5225764 bin=16ft_combo_ws3_JS1 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
argF; ornithine carbamoyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_23_114
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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comp(146554..147360)
-----------------
DNA (807bp)
protein (269aa)
Hydrolase, alpha/beta domain protein id=4311293 bin=GWF2_Bacteroidetes_43_63 species=Corynebacterium durum genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
Tax=GWF2_Bacteroidetes_43_63_curated
ERMGT100_2_curated_scaffold_23_115
unknown

Not on your lists

comp(147369..148466)
-----------------
DNA (1098bp)
protein (366aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_23_116
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

148577..149539
-----------------
DNA (963bp)
protein (321aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5A8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37418.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
ERMGT100_2_curated_scaffold_23_117
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149541..150272
-----------------
DNA (732bp)
protein (244aa)
ABC transporter, ATP-binding protein n=2 Tax=Geobacter metallireducens RepID=Q39XX5_GEOMG
ybhF-C1; ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABB30899.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
ERMGT100_2_curated_scaffold_23_118
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

150269..151390
-----------------
DNA (1122bp)
protein (374aa)
ABC-2 type transporter n=3 Tax=Pelosinus RepID=I8S0I0_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
hypothetical protein
ERMGT100_2_curated_scaffold_23_119
unknown

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comp(151400..151933)
-----------------
DNA (534bp)
protein (178aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_23_120
unknown

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comp(152085..152189)
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

Displaying items 91-120 of 120 in total

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