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ERMGT100_2_curated_scaffold_155

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_155_1
unknown

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comp(237..1274)
-----------------
DNA (1038bp)
protein (346aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_155_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1291..2085
-----------------
DNA (795bp)
protein (265aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5SKM0_9ZZZZ id=5225903 bin=16ft_combo_ws3_JS1 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
alanine racemase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2086..2385
-----------------
DNA (300bp)
protein (100aa)
putative integral membrane protein id=24446281 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2382..2669
-----------------
DNA (288bp)
protein (96aa)
hypothetical protein; K09131 hypothetical protein id=24446282 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
YggU superfamily protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2659..3519
-----------------
DNA (861bp)
protein (287aa)
purine nucleoside phosphorylase I (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QX39_ISOPI id=5225906 bin=16ft_combo_ws3_JS1 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3523..4431
-----------------
DNA (909bp)
protein (303aa)
DksA/TraR C4-type zinc finger protein id=24446284 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Streptomyces clavuligerus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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4428..5000
-----------------
DNA (573bp)
protein (191aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] id=24446285 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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5038..5880
-----------------
DNA (843bp)
protein (281aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=24446286 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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5895..6344
-----------------
DNA (450bp)
protein (150aa)
Putative anti sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A1_GEMAT id=5225910 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
anti-sigma regulatory factor, serine/threonine protein kinase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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6352..6777
-----------------
DNA (426bp)
protein (142aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] id=24446288 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Holliday junction resolvase YqgF
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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6786..8180
-----------------
DNA (1395bp)
protein (465aa)
Aminodeoxychorismate lyase n=1 Tax=Thermodesulfobacterium sp. (strain OPB45) RepID=F8C4X2_THESO id=5225912 bin=16ft_combo_ws3_JS1 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
aminodeoxychorismate lyase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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8216..9091
-----------------
DNA (876bp)
protein (292aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4A1_CALAS id=5225913 bin=16ft_combo_ws3_JS1 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
NAD synthase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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9272..9523
-----------------
DNA (252bp)
protein (84aa)
alias=16ft_combo_ws3_scaffold_9619_12 id=24446291 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_trna_1
unknown

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9514..9586
-----------------
DNA (73bp)
transferRNA Val
ERMGT100_2_curated_scaffold_155_14
unknown

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9879..10571
-----------------
DNA (693bp)
protein (231aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_155_15
unknown

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10680..11405
-----------------
DNA (726bp)
protein (242aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_155_16
unknown

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11448..12194
-----------------
DNA (747bp)
protein (249aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_155_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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12233..12985
-----------------
DNA (753bp)
protein (251aa)
alias=16ft_combo_ws3_scaffold_607_1 id=24491843 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
ERMGT100_2_curated_scaffold_155_18
unknown

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13033..13800
-----------------
DNA (768bp)
protein (256aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_155_19
unknown

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14044..14769
-----------------
DNA (726bp)
protein (242aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_155_20
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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comp(14842..16572)
-----------------
DNA (1731bp)
protein (577aa)
PpiC-type peptidyl-prolyl cis-trans isomerase id=1250264 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
ERMGT100_2_curated_scaffold_155_21
unknown

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16759..17487
-----------------
DNA (729bp)
protein (243aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_155_22
candidate division Zixibacteria, Bacteria

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comp(17488..19299)
-----------------
DNA (1812bp)
protein (604aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
PpiC-type peptidyl-prolyl cis-trans isomerase id=1250264 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
peptidylprolyl cis-trans isomerase lipoprotein, PpiC-type
ERMGT100_2_curated_scaffold_155_23
unknown

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comp(19412..20539)
-----------------
DNA (1128bp)
protein (376aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_155_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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20822..25060
-----------------
DNA (4239bp)
protein (1413aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJC3_IGNAJ id=5224325 bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_25
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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25057..26940
-----------------
DNA (1884bp)
protein (628aa)
Peptidyl-prolyl cis-trans isomerase ppiA n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=J2AET0_9DELT id=5224324 bin=16ft_combo_ws3_JS1 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_155_26

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comp(27010..27483)
-----------------
DNA (474bp)
protein (158aa)
Transposase n=1 Tax=sediment metagenome RepID=D9PLF3_9ZZZZ
Transposase {ECO:0000313|EMBL:EFK95612.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
hypothetical protein
Displaying 27 items

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