ggKbase home page

ERMZT100_curated_scaffold_313

Search features with annotation key words

Displaying items 1-30 of 73 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT100_curated_scaffold_313_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250..1281)
DNA (1032bp) protein (344aa)
Putative uncharacterized protein id=2110000 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_313_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1438..2148
DNA (711bp) protein (237aa)
Arylmalonate decarboxylase id=1831525 bin=GWD2_Deltaproteobacteria_55_8 species=Pyrococcus yayanosii genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
arylmalonate decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMZT100_curated_scaffold_313_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2329..3180
DNA (852bp) protein (284aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ERMZT100_curated_scaffold_313_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3269..4297
DNA (1029bp) protein (343aa)
(S)-2-hydroxy-acid oxidase n=2 Tax=Cyanothece RepID=G6GU83_9CHRO
FMN-dependent alpha-hydroxy acid dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_313_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4294..4851
DNA (558bp) protein (186aa)
LemA family protein id=4804949 bin=GWC2_Deltaproteobacteria_42_51 species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ERMZT100_curated_scaffold_313_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4960..5994
DNA (1035bp) protein (345aa)
Protease HtpX homolog id=2116256 bin=GWD2_Deltaproteobacteria_55_8 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
HtpX-2 peptidase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ERMZT100_curated_scaffold_313_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6047..6571
DNA (525bp) protein (175aa)
id=2116211 bin=GWD2_Deltaproteobacteria_55_8 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_313_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6579..6959)
DNA (381bp) protein (127aa)
L-PSP (MRNA) endoribonuclease id=2116209 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
translation initiation inhibitor
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ERMZT100_curated_scaffold_313_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7094..8530
DNA (1437bp) protein (479aa)
Putative permease (Major facilitator superfamily) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7Q2_UNCMA
major facilitator superfamily permease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_313_10
unknown

Not on your lists

8821..9009
DNA (189bp) protein (63aa)

This feature has no annotations

ERMZT100_curated_scaffold_313_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9040..9333
DNA (294bp) protein (98aa)
HNH endonuclease family protein id=2116207 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
HNH endonuclease family protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
ERMZT100_curated_scaffold_313_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9455..10189
DNA (735bp) protein (245aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_313_13
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10345..11310)
DNA (966bp) protein (322aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBH1_ANADF
magnesium and cobalt transport protein CorA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMZT100_curated_scaffold_313_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11627..12181
DNA (555bp) protein (185aa)
Appr-1-p processing id=2116205 bin=GWD2_Deltaproteobacteria_55_8 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Appr-1-p processing
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_313_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12229..13209
DNA (981bp) protein (327aa)
Putative uncharacterized protein id=1956523 bin=GWD2_Deltaproteobacteria_55_8 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_313_16
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

13301..14725
DNA (1425bp) protein (475aa)
glycine reductase complex protein C large subunit (EC:2.7.-.-)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI00031A18B3
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
ERMZT100_curated_scaffold_313_17
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

14805..14930
DNA (126bp) protein (42aa)
glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.2)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EB61_9FIRM
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
ERMZT100_curated_scaffold_313_18
Coprothermobacter proteolyticus, Coprothermobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

14946..15260
DNA (315bp) protein (105aa)
glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.2 1.21.4.3 1.21.4.4)
Glycine/sarcosine/betaine reductase complex component A1 (Selenoprotein PA 1) (Thioredoxinreductase complex A 1) {ECO:0000313|EMBL:ACI18238.1}; EC=1.21.4.2 {ECO:0000313|EMBL:ACI18238.1};; EC=1.21.4.3 {ECO:0000313|EMBL:ACI18238.1};; EC=1.21.4.4 {ECO:0000313|EMBL:ACI18238.1};; TaxID=309798 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermodesulfobiaceae; Coprothermobacter.;" source="Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT).;"
Glycine/sarcosine/betaine reductase complex component A1 (Selenoprotein PA 1) (Thioredoxinreductase complex A 1) n=1 Tax=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) RepID=B5Y745_COPPD
ERMZT100_curated_scaffold_313_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15364..16362)
DNA (999bp) protein (333aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=2116203 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_313_20
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16478..17125
DNA (648bp) protein (216aa)
Predicted phosphatase id=2116199 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phosphatase
Tax=GWD2_Deltaproteobacteria_55_8_curated
ERMZT100_curated_scaffold_313_21
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17160..17558
DNA (399bp) protein (133aa)
Pyridoxamine 5'-phosphate oxidase id=2116196 bin=GWD2_Deltaproteobacteria_55_8 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_313_22
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(17607..19019)
DNA (1413bp) protein (471aa)
sthA; soluble pyridine nucleotide transhydrogenase (EC:1.6.1.1)
Soluble pyridine nucleotide transhydrogenase {ECO:0000313|EMBL:CBK40958.1}; EC=1.6.1.1 {ECO:0000313|EMBL:CBK40958.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Soluble pyridine nucleotide transhydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCJ9_9BACT
ERMZT100_curated_scaffold_313_23
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(19044..19994)
DNA (951bp) protein (317aa)
ornithine cyclodeaminase (EC:4.3.1.12)
ornithine cyclodeaminase; K01750 ornithine cyclodeaminase [EC:4.3.1.12] id=14630753 bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
ERMZT100_curated_scaffold_313_24

Not on your lists

comp(20103..21059)
DNA (957bp) protein (319aa)
Methyltransferase FkbM n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1A0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKO11715.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Methyltransferase FkbM family
ERMZT100_curated_scaffold_313_25
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21286..21960)
DNA (675bp) protein (225aa)
GltK1 id=3247815 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative polar amino acid ABC transporter, inner membrane subunit
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ERMZT100_curated_scaffold_313_26
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21962..22681)
DNA (720bp) protein (240aa)
GltJ1 id=2259318 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polar amino acid ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_313_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22741..23592)
DNA (852bp) protein (284aa)
gltB1; protein GltB1 (EC:1.4.1.13)
GltB1 id=3247984 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ERMZT100_curated_scaffold_313_28
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23603..24376)
DNA (774bp) protein (258aa)
Phosphate-transporting ATPase id=14625833 bin=bin7_NC10_sister species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
glutamine transport ATP-binding protein glnQ
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ERMZT100_curated_scaffold_313_29
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24531..24989
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIA4_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_313_30
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25079..26365
DNA (1287bp) protein (429aa)
gltA; citrate synthase (EC:2.3.3.1) id=14430702 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
citrate synthase I (EC:2.3.3.1)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying items 1-30 of 73 in total

View Taxonomy