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ERMGT100_2_curated_scaffold_1

Search features with annotation key words

Displaying items 61-90 of 416 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_1_61
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(80115..80921)
-----------------
DNA (807bp)
protein (269aa)
Oxidoreductase, SDR family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBM9_SINAD
Carveol dehydrogenase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_62
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(80922..81449)
-----------------
DNA (528bp)
protein (176aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9Z0_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26062.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
ERMGT100_2_curated_scaffold_1_63
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(81561..82232)
-----------------
DNA (672bp)
protein (224aa)
Tetratricopeptide repeat protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJ94_ANADE
hypothetical protein
Tax=CG_Elusi_04
ERMGT100_2_curated_scaffold_1_64
unknown

Not on your lists

comp(82253..82570)
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_1_65
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

82621..84642
-----------------
DNA (2022bp)
protein (674aa)
CHASE2 domain-containing protein,Stage II sporulation protein E (SpoIIE) id=3863963 bin=GWC2_OP3-like_45_7 species=Streptococcus sp. M143 genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
stage II sporulation E family protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
ERMGT100_2_curated_scaffold_1_66
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(84653..85501)
-----------------
DNA (849bp)
protein (283aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QWG6_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB17769.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
ERMGT100_2_curated_scaffold_1_67
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(85523..86803)
-----------------
DNA (1281bp)
protein (427aa)
Isocitrate dehydrogenase [NADP] n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCE2_ANADF
isocitrate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ERMGT100_2_curated_scaffold_1_68
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(86800..88587)
-----------------
DNA (1788bp)
protein (596aa)
Isocitrate dehydrogenase kinase/phosphatase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=ACEK_ANADF
aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase protein
Tax=RBG_16_Chloroflexi_63_12_curated
ERMGT100_2_curated_scaffold_1_69
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88704..89426
-----------------
DNA (723bp)
protein (241aa)
Probable transcriptional regulatory protein Adeh_2184 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Y2184_ANADE
Probable transcriptional regulatory protein PSR1_00981 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
hypothetical protein
ERMGT100_2_curated_scaffold_1_70
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

89423..90232
-----------------
DNA (810bp)
protein (270aa)
methyltransferase id=24436676 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
methyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_71
RLO_PLX_64_10, Bacteria

Not on your lists

comp(90229..91422)
-----------------
DNA (1194bp)
protein (398aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7A6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
ERMGT100_2_curated_scaffold_1_72
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(91419..93245)
-----------------
DNA (1827bp)
protein (609aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S7C7_METSF
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADC68937.1}; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. (strain FS406-22).;"
ERMGT100_2_curated_scaffold_1_73
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(93242..93904)
-----------------
DNA (663bp)
protein (221aa)
Blue (Type 1) copper domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK46_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
ERMGT100_2_curated_scaffold_1_74
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(94007..94786)
-----------------
DNA (780bp)
protein (260aa)
peptidase A24A domain-containing protein; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] id=24447049 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Acidithiobacillus thiooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase A24A domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_75
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

94945..95265
-----------------
DNA (321bp)
protein (107aa)
alias=16ft_combo_ws3_scaffold_3544_16 id=24447048 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_76
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(95319..96572)
-----------------
DNA (1254bp)
protein (418aa)
type II secretory pathway, component PulD id=24447047 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
type II and III secretion system protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_77
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(96577..97053)
-----------------
DNA (477bp)
protein (159aa)
alias=16ft_combo_ws3_scaffold_3544_14 id=24447046 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_78
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(97050..97604)
-----------------
DNA (555bp)
protein (185aa)
id=5224842 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_79
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(97601..98173)
-----------------
DNA (573bp)
protein (191aa)
alias=16ft_combo_ws3_scaffold_3544_12 id=24447044 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_80
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(98170..99210)
-----------------
DNA (1041bp)
protein (347aa)
type IV pilus assembly protein PilM id=24447043 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
type IV pilus assembly protein PilM
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_81
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(99226..100473)
-----------------
DNA (1248bp)
protein (416aa)
alias=16ft_combo_ws3_scaffold_3544_10 id=24447042 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_82
unknown

Not on your lists

comp(100470..100973)
-----------------
DNA (504bp)
protein (168aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_1_83
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(100978..101382)
-----------------
DNA (405bp)
protein (135aa)
alias=16ft_combo_ws3_scaffold_3544_8 id=24447040 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_84
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(101394..101804)
-----------------
DNA (411bp)
protein (137aa)
Uncharacterized protein n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E7F0_9FIRM id=5224836 bin=16ft_combo_ws3_JS1 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_85
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(101945..103264)
-----------------
DNA (1320bp)
protein (440aa)
Type IV pilus biogenesis protein PilC n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VJ40_CLOAI id=5224835 bin=16ft_combo_ws3_JS1 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
pilin biogenesis protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_86
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(103254..104978)
-----------------
DNA (1725bp)
protein (575aa)
Type IV pilus assembly protein tapB n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMG4_9BACT id=5224834 bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
tapB; type IV pilus assembly protein tapB
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_87
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(104975..106102)
-----------------
DNA (1128bp)
protein (376aa)
pilus retraction protein PilT; K02669 twitching motility protein PilT id=24447036 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
twitching motility protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_88
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

106656..107480
-----------------
DNA (825bp)
protein (275aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-L05 RepID=UPI000373F26A
Ig-like domain-containing protein
Tax=RBG_16_Zixibacteria_53_22_curated
ERMGT100_2_curated_scaffold_1_89
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

107555..108196
-----------------
DNA (642bp)
protein (214aa)
Pectinesterase n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B676_9MICO id=5224831 bin=16ft_combo_ws3_JS1 species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Ig-like domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_90
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

108211..109737
-----------------
DNA (1527bp)
protein (509aa)
Uncharacterized protein n=1 Tax=Phytophthora ramorum RepID=H3GMJ7_PHYRM id=5223317 bin=16ft_combo_ws3_JS1 species=Phytophthora ramorum genus=Phytophthora taxon_order=Peronosporales taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 61-90 of 416 in total

View Taxonomy