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ERMGT100_2_curated_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 416 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_1_1
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..6207)
-----------------
DNA (6207bp)
protein (2069aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI00035E01CF
Uncharacterized protein {ECO:0000313|EMBL:KFE72233.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
ERMGT100_2_curated_scaffold_1_2
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(6360..7205)
-----------------
DNA (846bp)
protein (282aa)
Ig domain-containing protein group 2 domain-containing protein id=24491842 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_Caldithrix_48_16_curated
ERMGT100_2_curated_scaffold_1_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7356..9887)
-----------------
DNA (2532bp)
protein (844aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEQ9_RHOMR
hypothetical protein
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEN72827.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
ERMGT100_2_curated_scaffold_1_4
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10097..11473)
-----------------
DNA (1377bp)
protein (459aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MEU3_CORCM
Uncharacterized protein {ECO:0000313|EMBL:KFE64235.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
ERMGT100_2_curated_scaffold_1_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11516..15991)
-----------------
DNA (4476bp)
protein (1492aa)
hypothetical protein id=24433147 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMGT100_2_curated_scaffold_1_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(16339..18258)
-----------------
DNA (1920bp)
protein (640aa)
Putative DNA-directed DNA polymerase, family X, modulated with phosphoesterase domain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJE6_9BACT id=5224354 bin=16ft_combo_ws3_JS1 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
polX; DNA polymerase X
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(18255..20279)
-----------------
DNA (2025bp)
protein (675aa)
ligA; DNA ligase (NAD(+)) (EC:6.5.1.2)
DNA ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEU7_9BACT id=5224353 bin=16ft_combo_ws3_JS1 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_8
unknown

Not on your lists

20298..21029
-----------------
DNA (732bp)
protein (244aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_1_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

21035..22264
-----------------
DNA (1230bp)
protein (410aa)
hypothetical protein id=24463449 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Lewinella cohaerens genus=Lewinella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(22261..22542)
-----------------
DNA (282bp)
protein (94aa)
ThiamineS protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y928_THEBD id=5225419 bin=16ft_combo_ws3_JS1 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
moeB; molybdopterin biosynthesis protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(22542..23825)
-----------------
DNA (1284bp)
protein (428aa)
Uncharacterized protein n=1 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FA91_SACEN id=5225420 bin=16ft_combo_ws3_JS1 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycosyl hydrolase BNR repeat-containing glycosyl hydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(23840..25237)
-----------------
DNA (1398bp)
protein (466aa)
Putative dioxygenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAB4_SINAD id=5225421 bin=16ft_combo_ws3_JS1 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
dioxygenase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

25359..26225
-----------------
DNA (867bp)
protein (289aa)
Lysophospholipase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JS86_9GAMM id=5225423 bin=16ft_combo_ws3_JS1 species=gamma proteobacterium HTCC5015 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
lysophospholipase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_14
unknown

Not on your lists

comp(26222..26722)
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_1_15
unknown

Not on your lists

comp(26873..27634)
-----------------
DNA (762bp)
protein (254aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_1_16
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(27868..29358)
-----------------
DNA (1491bp)
protein (497aa)
Glycerol kinase id=4903991 bin=GWC2_Methylomirabilis_70_16 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glpK; glycerol kinase
Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
ERMGT100_2_curated_scaffold_1_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(29362..30810)
-----------------
DNA (1449bp)
protein (483aa)
FAD dependent oxidoreductase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12G94_POLSJ
FAD dependent oxidoreductase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_18
Hyphomonas beringensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30830..31750)
-----------------
DNA (921bp)
protein (307aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R1D6_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KCZ55889.1}; TaxID=1280946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas beringensis.;"
ERMGT100_2_curated_scaffold_1_19
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(31747..32730)
-----------------
DNA (984bp)
protein (328aa)
NHL repeat containing protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GI56_METPE
NHL repeat containing protein
NHL repeat containing protein {ECO:0000313|EMBL:ACL16796.1}; Flags: Precursor;; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
ERMGT100_2_curated_scaffold_1_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(32829..33701)
-----------------
DNA (873bp)
protein (291aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E7L0_GEOLS id=5225563 bin=16ft_combo_ws3_JS1 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
conserved hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_21
unknown

Not on your lists

33922..34119
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_1_22
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

34198..34785
-----------------
DNA (588bp)
protein (196aa)
Ig domain protein group 2 domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEJ5_RHOMR id=5225845 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_23
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

34866..35717
-----------------
DNA (852bp)
protein (284aa)
hypothetical protein id=24437569 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_Caldithrix_48_16_curated
ERMGT100_2_curated_scaffold_1_24
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

35714..36250
-----------------
DNA (537bp)
protein (179aa)
redoxin n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034DDB12
peroxiredoxin-like protein
Tax=RBG_16_Caldithrix_48_16_curated
ERMGT100_2_curated_scaffold_1_25
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36247..37800
-----------------
DNA (1554bp)
protein (518aa)
hypothetical protein id=4876599 bin=GWA2_Bacteroidetes_A19_40_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_40_15_curated
ERMGT100_2_curated_scaffold_1_26
unknown

Not on your lists

37871..39037
-----------------
DNA (1167bp)
protein (389aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_1_27
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria

Not on your lists

comp(39273..39878)
-----------------
DNA (606bp)
protein (202aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y8U8_9BACT
phospholipid/glycerol acyltransferase
Tax=RifOxyB12_full_OP3_50_7_curated
ERMGT100_2_curated_scaffold_1_28
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria

Not on your lists

comp(39901..40839)
-----------------
DNA (939bp)
protein (313aa)
ypi:YpsIP31758_3005 cdsA2; phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] id=127088 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
phosphatidate cytidylyltransferase
Tax=RifOxyB12_full_OP3_50_7_curated
ERMGT100_2_curated_scaffold_1_29
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria

Not on your lists

comp(40836..41447)
-----------------
DNA (612bp)
protein (204aa)
Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XI56_9ENTR id=127085 bin=ACD79 species=Providencia alcalifaciens genus=Providencia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
CDP-alcohol phosphatidyltransferase protein
Tax=RifOxyB12_full_OP3_50_7_curated
ERMGT100_2_curated_scaffold_1_30
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41540..44776)
-----------------
DNA (3237bp)
protein (1079aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI0003673D77
ATPase {ECO:0000313|EMBL:ERG44548.1}; Flags: Fragment;; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas rubra ATCC 29570.;"
hypothetical protein
Displaying items 1-30 of 416 in total

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