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ERMGT100_2_curated_scaffold_92

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_92_1
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(136..1821)
-----------------
DNA (1686bp)
protein (562aa)
peptidase S8/S53 subtilisin kexin sedolisin id=56645 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
subtilisin-like serine protease
Tax=RBG_16_Zixibacteria_53_22_curated
ERMGT100_2_curated_scaffold_92_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(1887..2405)
-----------------
DNA (519bp)
protein (173aa)
hypothetical protein id=24588447 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
response regulator receiver protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_92_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

2601..3752
-----------------
DNA (1152bp)
protein (384aa)
Putative uncharacterized protein n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CMZ2_ROBBH
Protein of unknown function DUF2911
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMGT100_2_curated_scaffold_92_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

4011..6680
-----------------
DNA (2670bp)
protein (890aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z144_9BACT id=5225473 bin=16ft_combo_ws3_JS1 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
type 11 methyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_92_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6765..7949)
-----------------
DNA (1185bp)
protein (395aa)
h16_A1828; glucose/sorbosone dehydrogenase (EC:1.1.1.-)
hypothetical protein id=24459545 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_92_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8041..9840)
-----------------
DNA (1800bp)
protein (600aa)
Serine/threonine protein kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ32_KORVE
serine/threonine protein kinase
Tax=RBG_16_Acidobacteria_70_10_curated
ERMGT100_2_curated_scaffold_92_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

10068..10427
-----------------
DNA (360bp)
protein (120aa)
id=14624314 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=RBG_13_Acidobacteria_68_16_curated
ERMGT100_2_curated_scaffold_92_8
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

10429..11319
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein id=14624315 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=RBG_13_Acidobacteria_68_16_curated
ERMGT100_2_curated_scaffold_92_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11322..12407)
-----------------
DNA (1086bp)
protein (362aa)
Redoxin domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028K1_SOLUE
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:ABJ82551.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMGT100_2_curated_scaffold_92_10
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12559..13128)
-----------------
DNA (570bp)
protein (190aa)
Uncharacterized protein n=34 Tax=Bordetella RepID=F4LGX1_BORPC
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAE41512.1}; TaxID=257313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251).;"
ERMGT100_2_curated_scaffold_92_11
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13215..14111)
-----------------
DNA (897bp)
protein (299aa)
Glycosyl transferase family 2 {ECO:0000313|EMBL:EMI41144.1}; EC=2.-.-.- {ECO:0000313|EMBL:EMI41144.1};; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
Glycosyl transferase family 2 n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5SWF0_9PLAN
family 2 glycosyl transferase
ERMGT100_2_curated_scaffold_92_12
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14108..15358)
-----------------
DNA (1251bp)
protein (417aa)
FAD dependent oxidoreductase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HSA3_CYAP4
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACL44209.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
ERMGT100_2_curated_scaffold_92_13
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15589..17745
-----------------
DNA (2157bp)
protein (719aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037DCFAF
Putative uncharacterized protein {ECO:0000313|EMBL:GAB06272.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
hypothetical protein
ERMGT100_2_curated_scaffold_92_14
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17773..18948)
-----------------
DNA (1176bp)
protein (392aa)
Uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7ZH69_BDEBC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY03177.1}; TaxID=1069642 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus str. Tiberius.;"
ERMGT100_2_curated_scaffold_92_15
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19076..21514
-----------------
DNA (2439bp)
protein (813aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI0003450C03
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL45062.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
ERMGT100_2_curated_scaffold_92_16
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21809..22861
-----------------
DNA (1053bp)
protein (351aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034DEC72
zinc finger SWIM domain-containing protein
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:ACL58061.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
ERMGT100_2_curated_scaffold_92_17
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22877..23077)
-----------------
DNA (201bp)
protein (67aa)
Cro/Cl family transcriptional regulator n=1 Tax=Ponticaulis koreensis RepID=UPI0003B4BD42
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ENZ80850.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
Cro/CI family transcriptional regulator
ERMGT100_2_curated_scaffold_92_18
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23074..24498)
-----------------
DNA (1425bp)
protein (475aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1PDC6_METMZ
Uncharacterized protein {ECO:0000313|EMBL:AKB61389.1}; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei SarPi.;"
hypothetical protein
ERMGT100_2_curated_scaffold_92_19
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24510..24914)
-----------------
DNA (405bp)
protein (135aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WXF6_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:KGM53149.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
ERMGT100_2_curated_scaffold_92_20
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25260..26357)
-----------------
DNA (1098bp)
protein (366aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GGY3_9BACT
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:CCH53158.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ThiJ/PfpI domain-containing protein
ERMGT100_2_curated_scaffold_92_21
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26474..27247)
-----------------
DNA (774bp)
protein (258aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FWF0_STIAD
LyTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADO76056.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
ERMGT100_2_curated_scaffold_92_22
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(27244..28308)
-----------------
DNA (1065bp)
protein (355aa)
Signal transduction histidine kinase, LytS n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZQK3_OPITP
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACB75612.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
ERMGT100_2_curated_scaffold_92_23
'Deinococcus soli' Cha et al. 2014, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

28444..28980
-----------------
DNA (537bp)
protein (179aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI0003657AE7
Uncharacterized protein {ECO:0000313|EMBL:AKH16568.1}; TaxID=1309411 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="'Deinococcus soli' Cha et al. 2014.;"
hypothetical protein
ERMGT100_2_curated_scaffold_92_24

Not on your lists

comp(29905..31404)
-----------------
DNA (1500bp)
protein (500aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C8385
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49274.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative peptidase M20 family protein
ERMGT100_2_curated_scaffold_92_25
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(31556..33295)
-----------------
DNA (1740bp)
protein (580aa)
hypothetical protein id=24515771 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Eimeria mitis genus=Eimeria taxon_order=Eucoccidiorida taxon_class=Coccidia phylum=Apicomplexa tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
type II secretory pathway protein ExeA
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_92_26
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(33400..34260)
-----------------
DNA (861bp)
protein (287aa)
hypothetical protein id=24515767 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
beta-lactamase domain protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_92_27
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34391..35110)
-----------------
DNA (720bp)
protein (240aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HA15_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF86647.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
ERMGT100_2_curated_scaffold_92_28
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

35341..37122
-----------------
DNA (1782bp)
protein (594aa)
PAS modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NQA1_GRAMM
PAS modulated Fis family sigma-54-specific transcriptional regulator
PAS modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:AEU34957.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
ERMGT100_2_curated_scaffold_92_29
unknown

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37186..37248
-----------------
DNA (63bp)
protein (21aa)

This feature has no annotations

Displaying 29 items

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