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ERMGT500_2_curated_scaffold_1

Search features with annotation key words

Displaying items 31-60 of 355 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_1_30
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25972..28383)
-----------------
DNA (2412bp)
protein (804aa)
Phenylalanyl-tRNA synthetase subunit beta n=2 Tax=Pandoraea RepID=V5UAU5_9BURK
phenylalanyl-tRNA synthetase subunit beta
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
ERMGT500_2_curated_scaffold_1_31
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28411..28632)
-----------------
DNA (222bp)
protein (74aa)
Phenylalanyl tRNA synthetase alpha suspected. See adjacent gene [ERMGT500_2_curated_scaffold_1_32].
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UXY1_ALCFA
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
ERMGT500_2_curated_scaffold_1_32
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28629..29336)
-----------------
DNA (708bp)
protein (236aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=SYFA_JANMA
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_33
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29471..29830)
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L20 n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000366437C
rplT; 50S ribosomal protein L20
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT500_2_curated_scaffold_1_34
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29842..30039)
-----------------
DNA (198bp)
protein (66aa)
50S ribosomal protein L35 id=2036117 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
rpmI; 50S ribosomal protein L35
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_1_35
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30133..30678)
-----------------
DNA (546bp)
protein (182aa)
Translation initiation factor IF-3 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBS5_NITMU
translation initiation factor IF-3
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_1_36
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30756..32669)
-----------------
DNA (1914bp)
protein (638aa)
Threonine--tRNA ligase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHX7_AZOSU
threonyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT500_2_curated_scaffold_1_37
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32712..33332)
-----------------
DNA (621bp)
protein (207aa)
phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17)
Phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase n=2 Tax=Nitrosococcus oceani RepID=Q3JCM0_NITOC
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_1_trna_18
unknown

Not on your lists

comp(33478..33551)
-----------------
DNA (74bp)
transferRNA Val
ERMGT500_2_curated_scaffold_1_38
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33628..33996)
-----------------
DNA (369bp)
protein (123aa)
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_39
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34044..35705)
-----------------
DNA (1662bp)
protein (554aa)
DNA repair protein RecN n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABJ3_9PROT
DNA repair protein RecN
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_40
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35761..36630)
-----------------
DNA (870bp)
protein (290aa)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHL4_AZOSU
NAD(+) kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_1_41
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36729..37748
-----------------
DNA (1020bp)
protein (340aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLX8_9PROT
heat-inducible transcription repressor HrcA
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
ERMGT500_2_curated_scaffold_1_42
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37824..38927
-----------------
DNA (1104bp)
protein (368aa)
hemH; ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=HEMH_AROAE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT500_2_curated_scaffold_1_43
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39037..39630
-----------------
DNA (594bp)
protein (198aa)
Protein GrpE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG60_9PROT
GrpE protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_44
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39682..41610
-----------------
DNA (1929bp)
protein (643aa)
molecular chaperone DnaK n=1 Tax=Azoarcus toluclasticus RepID=UPI00036CAD39
dnaK; chaperone protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_1_45
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41712..42833
-----------------
DNA (1122bp)
protein (374aa)
Chaperone protein DnaJ n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHM3_AZOSU
chaperone protein DnaJ
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_1_46
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43044..44183
-----------------
DNA (1140bp)
protein (380aa)
Extracellular ligand-binding receptor n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AJ06_COLFT
ABC transporter substrate-binding protein
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEK60939.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
ERMGT500_2_curated_scaffold_1_47
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44225..45610)
-----------------
DNA (1386bp)
protein (462aa)
Cysteine--tRNA ligase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHM5_AZOSU
cysteinyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT500_2_curated_scaffold_1_48
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45681..46280
-----------------
DNA (600bp)
protein (200aa)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Thauera RepID=N6XMR3_9RHOO
peptidyl-prolyl cis-trans isomerase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_49
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46288..46779
-----------------
DNA (492bp)
protein (164aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI19_AZOSU
peptidyl-prolyl cis-trans isomerase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_50
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46788..47507
-----------------
DNA (720bp)
protein (240aa)
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJN6_9PROT
UDP-2,3-diacylglucosamine hydrolase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_51
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47602..48771)
-----------------
DNA (1170bp)
protein (390aa)
metZ; O-succinylhomoserine sulfhydrylase (EC:4.4.1.8)
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K4B6_AZOSB
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_52
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48918..50432)
-----------------
DNA (1515bp)
protein (505aa)
Amidophosphoribosyltransferase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIQ8_AZOSU
amidophosphoribosyltransferase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_53
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50452..50940)
-----------------
DNA (489bp)
protein (163aa)
Colicin V synthesis protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S020_9RALS
colicin V production protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_54
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50937..51158)
-----------------
DNA (222bp)
protein (74aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIR0_AZOSU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_1_55
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51580..52890)
-----------------
DNA (1311bp)
protein (437aa)
folC; bifunctional protein: folylpolyglutamate synthase and dihydrofolate synthase (EC:6.3.2.17)
Putative bifunctional protein: folylpolyglutamate synthase and dihydrofolate synthase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P1I7_AROAE
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_56
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52973..53842)
-----------------
DNA (870bp)
protein (290aa)
accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit b (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K4B1_AZOSB
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_57
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53839..54648)
-----------------
DNA (810bp)
protein (270aa)
tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XE15_METSD
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_58
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54645..55436)
-----------------
DNA (792bp)
protein (264aa)
DNA modification methylase n=1 Tax=Ralstonia pickettii OR214 RepID=R0E131_RALPI
DNA methylase N-4/N-6 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Displaying items 31-60 of 355 in total

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