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ERMGT500_2_curated_scaffold_1

Search features with annotation key words

Displaying items 61-90 of 355 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_1_59
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55433..56632)
-----------------
DNA (1200bp)
protein (400aa)
Tryptophan synthase beta chain n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRR9_ACCPU
tryptophan synthase subunit beta
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_60
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56619..57242)
-----------------
DNA (624bp)
protein (208aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUF7_SIDLE
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT500_2_curated_scaffold_1_61
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57239..58033)
-----------------
DNA (795bp)
protein (265aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9U5_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_1_62
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58098..61052)
-----------------
DNA (2955bp)
protein (985aa)
Peptidoglycan-binding LysM n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46YW2_CUPPJ
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:AAZ61671.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
ERMGT500_2_curated_scaffold_1_63
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61243..62361)
-----------------
DNA (1119bp)
protein (373aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Q9_NITMU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_1_64
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62435..63502)
-----------------
DNA (1068bp)
protein (356aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=LEU3_NITMU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT500_2_curated_scaffold_1_65
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63513..64154)
-----------------
DNA (642bp)
protein (214aa)
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T013_JANMA
ERMGT500_2_curated_scaffold_1_66
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64159..65565)
-----------------
DNA (1407bp)
protein (469aa)
leuC; isopropylmalate isomerase large subunit (EC:4.2.1.33)
isopropylmalate isomerase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E474E7
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_1_67
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65661..66476)
-----------------
DNA (816bp)
protein (272aa)
Conserved hypothetical secreted protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K4A0_AZOSB
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
ERMGT500_2_curated_scaffold_1_68
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66636..69596
-----------------
DNA (2961bp)
protein (987aa)
Spermine synthase id=1837380 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
spermine synthase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_1_69
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69598..70698)
-----------------
DNA (1101bp)
protein (367aa)
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Azoarcus sp. (strain BH72) RepID=AROC_AZOSB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_1_70
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70810..70989
-----------------
DNA (180bp)
protein (60aa)
Uncharacterized protein n=2 Tax=Burkholderia RepID=I5CGC4_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT500_2_curated_scaffold_1_71
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71234..73033
-----------------
DNA (1800bp)
protein (600aa)
cya-1; adenylate cyclase 1 (EC:4.6.1.1)
Adenylate cyclase 1 {ECO:0000313|EMBL:AJD39986.1}; EC=4.6.1.1 {ECO:0000313|EMBL:AJD39986.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
Probable adenylate class-3/4/guanylyl cyclase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AC24_RHIFH
ERMGT500_2_curated_scaffold_1_72
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73037..73489)
-----------------
DNA (453bp)
protein (151aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AC23_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE98602.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
ERMGT500_2_curated_scaffold_1_73
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73651..74178
-----------------
DNA (528bp)
protein (176aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L837_9GAMM
hypothetical protein
Tax=CG_Rhodocyc_01
ERMGT500_2_curated_scaffold_1_74
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74202..75209)
-----------------
DNA (1008bp)
protein (336aa)
peptidase M28 n=1 Tax=Acidovorax radicis RepID=UPI00023774E7
peptidase M28 family peptidase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_1_75
Aliivibrio fischeri, Aliivibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75238..75801)
-----------------
DNA (564bp)
protein (188aa)
Lipoprotein, putative n=1 Tax=Vibrio fischeri (strain MJ11) RepID=B5FC46_VIBFM
lipoprotein
Lipoprotein, putative {ECO:0000313|EMBL:ACH67203.1}; TaxID=388396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio.;" source="Vibrio fischeri (strain MJ11).;"
ERMGT500_2_curated_scaffold_1_76
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75827..76261)
-----------------
DNA (435bp)
protein (145aa)
XRE family transcriptional regulator n=1 Tax=Burkholderia kururiensis RepID=UPI00034A3D28
CBS domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT500_2_curated_scaffold_1_77
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76424..77269
-----------------
DNA (846bp)
protein (282aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000380F0D6
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_1_78
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77284..78432
-----------------
DNA (1149bp)
protein (383aa)
(2Fe-2S)-binding protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B039
putative dioxygenase ferredoxin subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_1_79
unknown

Not on your lists

78956..79435
-----------------
DNA (480bp)
protein (160aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_1_80
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(79616..80410)
-----------------
DNA (795bp)
protein (265aa)
Uncharacterized protein id=4673947 bin=GWF2_Nitrospirae_44_13 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=GWF2_Nitrospirae_44_13_curated
ERMGT500_2_curated_scaffold_1_81
unknown

Not on your lists

comp(80500..80679)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_1_82
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80747..81661)
-----------------
DNA (915bp)
protein (305aa)
Site-specific DNA methylase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WPJ2_9BRAD
Site-specific DNA methylase {ECO:0000313|EMBL:EJN14595.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
D12 class N6 adenine-specific DNA methyltransferase
ERMGT500_2_curated_scaffold_1_83
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81658..83028)
-----------------
DNA (1371bp)
protein (457aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I434_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:GAJ30714.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
hypothetical protein
ERMGT500_2_curated_scaffold_1_84
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83217..83825
-----------------
DNA (609bp)
protein (203aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U0ZPY1_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:ERE06615.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans EGD-HP2.;"
hypothetical protein
ERMGT500_2_curated_scaffold_1_85
unknown

Not on your lists

83894..84337
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_1_86
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84416..84883)
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLU9_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_1_87
unknown

Not on your lists

comp(84904..85290)
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_1_88
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85391..86746
-----------------
DNA (1356bp)
protein (452aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00036A46E0
Omega-amino acid--pyruvate aminotransferase {ECO:0000313|EMBL:KFE71478.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Displaying items 61-90 of 355 in total

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