ggKbase home page

ERMGT500_2_curated_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_41_1
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..597
-----------------
DNA (597bp)
protein (199aa)
Tax=RBG_16_Gamma2_60_9_curated
ERMGT500_2_curated_scaffold_41_2
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

610..861
-----------------
DNA (252bp)
protein (84aa)
Tax=RBG_16_Gamma2_60_9_curated
ERMGT500_2_curated_scaffold_41_3
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(998..2278)
-----------------
DNA (1281bp)
protein (427aa)
UDP-N-acetyl-D-galactosamine dehydrogenase n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000381BEF7
UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Tax=RBG_16_Gamma2_60_9_curated
ERMGT500_2_curated_scaffold_41_4
unknown

Not on your lists

2621..2896
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_41_5
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

3272..4318
-----------------
DNA (1047bp)
protein (349aa)
UDP-glucose 4-epimerase n=1 Tax=Thiocapsa marina 5811 RepID=F9UD55_9GAMM
UDP-glucose 4-epimerase
Tax=RBG_16_Zixibacteria_53_22_curated
ERMGT500_2_curated_scaffold_41_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4328..5389
-----------------
DNA (1062bp)
protein (354aa)
Uncharacterized 37.6 kDa protein in cld 5'region n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RAQ1_9RHOO
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT500_2_curated_scaffold_41_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5398..6150
-----------------
DNA (753bp)
protein (251aa)
TonB family protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFM1_AZOSU
TonB family protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_41_8
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6138..7265)
-----------------
DNA (1128bp)
protein (376aa)
Probable transport system ATP-binding protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P1A6_AROAE
transport system ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_41_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7366..9042
-----------------
DNA (1677bp)
protein (559aa)
iron ABC transporter permease n=1 Tax=Cupriavidus sp. WS RepID=UPI00037B39E5
Ferric iron ABC transporter, permease protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_41_10
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9070..10116)
-----------------
DNA (1047bp)
protein (349aa)
ABC transporter periplasmic protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SF26_9BURK
fbpA; iron(iii)-binding periplasmic protein precursor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_41_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10261..10719)
-----------------
DNA (459bp)
protein (153aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4A1_HERAR
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_41_12
unknown

Not on your lists

10743..11369
-----------------
DNA (627bp)
protein (209aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_41_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11396..13396
-----------------
DNA (2001bp)
protein (667aa)
Helicase c2 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIG6_ACCPU
helicase c2
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_41_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13377..14138)
-----------------
DNA (762bp)
protein (254aa)
competence protein ComL n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036668DF
outer membrane assembly lipoprotein YfiO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT500_2_curated_scaffold_41_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14173..15081
-----------------
DNA (909bp)
protein (303aa)
pseudouridine synthase RluD (EC:4.2.1.70)
Pseudouridine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7K0_NITMU
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_41_16
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15078..15818
-----------------
DNA (741bp)
protein (247aa)
Uncharacterized protein, YfiH family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QN42_AZOSU
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_41_17
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15822..16592
-----------------
DNA (771bp)
protein (257aa)
Zinc/iron permease n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACK4_9PROT
putative divalent heavy-metal cations transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT500_2_curated_scaffold_41_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16602..17354)
-----------------
DNA (753bp)
protein (251aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ralstonia sp. PBA RepID=I9BQS1_9RALS
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_41_19
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17392..17832)
-----------------
DNA (441bp)
protein (147aa)
Phosphohistidine phosphatase, SixA n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RDU3_9RHOO
phosphohistidine phosphatase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_41_20
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17950..18165
-----------------
DNA (216bp)
protein (72aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6T0_NITMU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_41_21
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18196..19596)
-----------------
DNA (1401bp)
protein (467aa)
Serine/threonine protein kinase n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RFA4_9RHOO
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT500_2_curated_scaffold_41_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19606..20043)
-----------------
DNA (438bp)
protein (146aa)
Ferric uptake regulator, Fur family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBT8_NITMU
ferric uptake regulator family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT500_2_curated_scaffold_41_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20125..20460
-----------------
DNA (336bp)
protein (112aa)
Outer membrane protein assembly factor BamE n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HJ0_DECAR
putative outer membrane lipoprotein OmlA
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_41_24
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20490..21254
-----------------
DNA (765bp)
protein (255aa)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPN3_9PROT
4-hydroxy-tetrahydrodipicolinate reductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_41_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21318..23393)
-----------------
DNA (2076bp)
protein (692aa)
Adenylate/guanylate cyclase family protein,protein kinase family protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D5D8_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT500_2_curated_scaffold_41_26
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23393..25138)
-----------------
DNA (1746bp)
protein (582aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Nostoc azollae (strain 0708) RepID=D7E087_NOSA0
multi-sensor signal transduction histidine kinase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_41_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25391..26524
-----------------
DNA (1134bp)
protein (378aa)
carbamoyl phosphate synthase small subunit n=1 Tax=Thiobacillus thioparus RepID=UPI000381DC0E
carA; carbamoyl-phosphate synthase small chain
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT500_2_curated_scaffold_41_28
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26517..29777
-----------------
DNA (3261bp)
protein (1087aa)
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGC2_9PROT
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_41_29
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29834..30343
-----------------
DNA (510bp)
protein (170aa)
Transcription elongation factor GreA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFS8_9PROT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
greA; transcription elongation factor
ERMGT500_2_curated_scaffold_41_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30387..30767
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein id=2720127 bin=GWF1_Spirochaetes_51_8 species=Cyanobacterium aponinum genus=Cyanobacterium taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
clan AA aspartic protease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Displaying items 1-30 of 46 in total

View Taxonomy