ggKbase home page

ERMGT500_2_curated_scaffold_43

Search features with annotation key words

Displaying items 31-58 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_43_31
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30429..32612)
-----------------
DNA (2184bp)
protein (728aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00037D514F
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT500_2_curated_scaffold_43_32
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32620..34266)
-----------------
DNA (1647bp)
protein (549aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XMA7_9RALS
long-chain fatty acid--CoA ligase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_43_33
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34364..36448
-----------------
DNA (2085bp)
protein (695aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030E6498
3-hydroxyacyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_43_34
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36460..37236
-----------------
DNA (777bp)
protein (259aa)
Short-chain dehydrogenase/reductase SDR n=4 Tax=Ralstonia RepID=B2UC11_RALPJ
gluconate 5-dehydrogenase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_43_35
unknown

Not on your lists

37226..37888
-----------------
DNA (663bp)
protein (221aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_43_36
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37912..38088
-----------------
DNA (177bp)
protein (59aa)
gluconate 2-dehydrogenase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D6DB34
gluconate 5-dehydrogenase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_43_37
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38078..38500
-----------------
DNA (423bp)
protein (141aa)
Thioesterase superfamily protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CQR2_9BURK
thioesterase superfamily protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_43_38
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38575..41949)
-----------------
DNA (3375bp)
protein (1125aa)
Calcium-translocating P-type ATPase, PMCA-type id=4960340 bin=GWC2_Syntrophobacterales_56_13 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
P-type HAD superfamily ATPase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
ERMGT500_2_curated_scaffold_43_39
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42437..43390
-----------------
DNA (954bp)
protein (318aa)
RuBisCO operon transcriptional regulator n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH46_9PROT
LysR family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_66_20_curated
ERMGT500_2_curated_scaffold_43_40
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43616..45046
-----------------
DNA (1431bp)
protein (477aa)
Malonyl-CoA decarboxylase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J9P5_9PROT
malonyl-CoA decarboxylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_43_41
unknown

Not on your lists

comp(45139..46389)
-----------------
DNA (1251bp)
protein (417aa)
hypothetical protein
ERMGT500_2_curated_scaffold_43_42
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46453..47229)
-----------------
DNA (777bp)
protein (259aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13DW7_RHOPS
oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
ERMGT500_2_curated_scaffold_43_43
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47236..49176)
-----------------
DNA (1941bp)
protein (647aa)
Protease n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GPH3_9GAMM
protease
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT500_2_curated_scaffold_43_44
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49208..49729)
-----------------
DNA (522bp)
protein (174aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ACU0_COLFT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
ERMGT500_2_curated_scaffold_43_45
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49906..50346)
-----------------
DNA (441bp)
protein (147aa)
Putative uncharacterized protein n=1 Tax=Dickeya dadantii (strain Ech703) RepID=C6C3W6_DICDC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS87293.1}; Flags: Precursor;; TaxID=579405 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya dadantii (strain Ech703).;"
ERMGT500_2_curated_scaffold_43_46
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50476..51081)
-----------------
DNA (606bp)
protein (202aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJQ2_ACHXA
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
ERMGT500_2_curated_scaffold_43_47
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51205..52887
-----------------
DNA (1683bp)
protein (561aa)
Long-chain-fatty-acid CoA ligase (AMP-forming) n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBP1_DESAA
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMGT500_2_curated_scaffold_43_48
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52884..53693
-----------------
DNA (810bp)
protein (270aa)
ABC transporter related protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDC1_9FIRM
branched-chain amino acid ABC transporter ATPase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT500_2_curated_scaffold_43_49
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53680..54429
-----------------
DNA (750bp)
protein (250aa)
ABC transporter related protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDC0_9FIRM
branched-chain amino acid ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMGT500_2_curated_scaffold_43_50
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54483..55607
-----------------
DNA (1125bp)
protein (375aa)
Spermidine/putrescine ABC transporter ATPase subunit id=2064948 bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter ATP-binding protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_43_51
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55673..56707
-----------------
DNA (1035bp)
protein (345aa)
Extracellular solute-binding protein family 1 id=1937571 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
extracellular solute-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_43_52
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56777..58504
-----------------
DNA (1728bp)
protein (576aa)
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein id=14631202 bin=bin9_gal15 species=Pseudomonas agarici genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT500_2_curated_scaffold_43_53
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58562..59614)
-----------------
DNA (1053bp)
protein (351aa)
Inner-membrane translocator n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBP0_DESAA
branched-chain amino acid ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT500_2_curated_scaffold_43_54
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59611..60480)
-----------------
DNA (870bp)
protein (290aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L6T0_9BACI
inner-membrane translocator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMGT500_2_curated_scaffold_43_55
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60575..61801)
-----------------
DNA (1227bp)
protein (409aa)
Extracellular ligand-binding receptor n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBN8_DESAA
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT500_2_curated_scaffold_43_56
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61930..62376
-----------------
DNA (447bp)
protein (149aa)
Acyl-CoA thioesterase, associated to tol-pal complex n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G0X9_RALS8
ybgC; acyl-CoA thioesterase, associated to tol-pal complex
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_43_57
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62424..63854
-----------------
DNA (1431bp)
protein (477aa)
h16_A1919; lactaldehyde dehydrogenase (EC:1.2.1.22)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000364A640
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT500_2_curated_scaffold_43_58
unknown

Not on your lists

64129..64365
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

Displaying items 31-58 of 58 in total

View Taxonomy