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ERMGT500_2_curated_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_43_1
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144..752)
-----------------
DNA (609bp)
protein (203aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GV1_POLSJ
pyridoxamine 5'-phosphate oxidase-like protein
Tax=RBG_16_Gamma2_60_9_curated
ERMGT500_2_curated_scaffold_43_2
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1078..2190)
-----------------
DNA (1113bp)
protein (371aa)
Aspartyl-tRNA(Asn) amidotransferase subunit A n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PHN7_9DELT
Amidase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_43_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2242..2715)
-----------------
DNA (474bp)
protein (158aa)
elongation factor Tu, domain 2 (EC:3.4.-.-)
NAD-dependent DNA ligase LigA id=4125350 bin=GWC2_Nitrospirae_57_13 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_43_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2806..4215)
-----------------
DNA (1410bp)
protein (470aa)
Glycerol-3-phosphate O-acyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNR6_9BURK
acyltransferase family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_43_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4329..5324)
-----------------
DNA (996bp)
protein (332aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Succinatimonas hippei YIT 12066 RepID=E8LKQ3_9GAMM
band 7 protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_43_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5371..5802)
-----------------
DNA (432bp)
protein (144aa)
membrane protein implicated in regulation of membrane protease activity n=1 Tax=Ralstonia solanacearum RepID=UPI000303A9EA
NfeD-like family protein 1
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_43_7
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5861..6340)
-----------------
DNA (480bp)
protein (160aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F2E1DC
nodulation protein N
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_43_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6376..6756
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein n=4 Tax=root RepID=E6QCV8_9ZZZZ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ERMGT500_2_curated_scaffold_43_9
unknown

Not on your lists

6781..6888
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_43_10
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7044..7847)
-----------------
DNA (804bp)
protein (268aa)
ABC-type phosphate transport system periplasmic component-like protein id=4122894 bin=GWC2_Pelobacter_58_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
phosphate ABC transporter periplasmic component-like protein
Tax=GWC2_Pelobacteraceae_58_13_curated
ERMGT500_2_curated_scaffold_43_11
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7844..9577)
-----------------
DNA (1734bp)
protein (578aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000372790C
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AEJ02470.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
ERMGT500_2_curated_scaffold_43_12
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10155..13598
-----------------
DNA (3444bp)
protein (1148aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Pyruvate carboxylase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q4Z9_9RHOO
pyruvate carboxylase
ERMGT500_2_curated_scaffold_43_13
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13595..15037
-----------------
DNA (1443bp)
protein (481aa)
ABC transporter substrate-binding protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00035F75A5
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM42249.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
ABC transporter substrate-binding protein
ERMGT500_2_curated_scaffold_43_14
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15040..15924
-----------------
DNA (885bp)
protein (295aa)
ABC-type nitrate/sulfonate/bicarbonate transport system n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W662_MAGSA
ABC-type nitrate/sulfonate/bicarbonate transport system
ABC-type nitrate/sulfonate/bicarbonate transport system {ECO:0000313|EMBL:BAE50663.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
ERMGT500_2_curated_scaffold_43_15
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15926..16873
-----------------
DNA (948bp)
protein (316aa)
hypothetical protein n=1 Tax=Rhodocyclaceae RepID=UPI00037CF2A0
Sulfonate ABC transporter ATP-binding lipoprotein {ECO:0000313|EMBL:ETR77249.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ABC transporter-like protein
ERMGT500_2_curated_scaffold_43_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16833..17681
-----------------
DNA (849bp)
protein (283aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003675BB7
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ERMGT500_2_curated_scaffold_43_17
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17754..18821)
-----------------
DNA (1068bp)
protein (356aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQX5_ACCPU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
ERMGT500_2_curated_scaffold_43_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19048..19428
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein n=4 Tax=root RepID=E6QCV8_9ZZZZ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ERMGT500_2_curated_scaffold_43_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

19655..20719
-----------------
DNA (1065bp)
protein (355aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI000371E4BA
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
ERMGT500_2_curated_scaffold_43_20
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20700..21659)
-----------------
DNA (960bp)
protein (320aa)
Sco1/senc, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TJI7_RICCO
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone {ECO:0000313|EMBL:CDS54260.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
cytochrome c family protein
ERMGT500_2_curated_scaffold_43_21
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21742..22266)
-----------------
DNA (525bp)
protein (175aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AWC3_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN48856.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
ERMGT500_2_curated_scaffold_43_22
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(22285..24495)
-----------------
DNA (2211bp)
protein (737aa)
Spore coat protein, putative {ECO:0000313|EMBL:EEF27741.1}; EC=1.3.3.5 {ECO:0000313|EMBL:EEF27741.1};; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
Spore coat protein, putative n=1 Tax=Ricinus communis RepID=B9T8S7_RICCO
hypothetical protein
ERMGT500_2_curated_scaffold_43_23
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25004..25789)
-----------------
DNA (786bp)
protein (262aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUI5_ACCPU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_43_24
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

25986..26201
-----------------
DNA (216bp)
protein (72aa)
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
ERMGT500_2_curated_scaffold_43_25
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

26198..26608
-----------------
DNA (411bp)
protein (137aa)
Putative nucleic acid-binding protein, contains PIN domain n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QRT0_NOSS7
putative nucleic acid-binding protein, contains PIN domain
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:AFY47527.1}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
ERMGT500_2_curated_scaffold_43_26
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26654..27823
-----------------
DNA (1170bp)
protein (390aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036D73BC
major facilitator transporter
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_43_27
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27906..28097
-----------------
DNA (192bp)
protein (64aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_43_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28094..29107
-----------------
DNA (1014bp)
protein (338aa)
Bacterial luciferase-like protein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6FZJ8_RALS8
bacterial luciferase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT500_2_curated_scaffold_43_29
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29170..29913
-----------------
DNA (744bp)
protein (248aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ERMGT500_2_curated_scaffold_43_30
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29925..30392)
-----------------
DNA (468bp)
protein (156aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00036F9CAF
(2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ADB41393.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying items 1-30 of 58 in total

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