ggKbase home page

ERMGT500_2_curated_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_55_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2..229
-----------------
DNA (228bp)
protein (76aa)
Integrase catalytic region n=3 Tax=mine drainage metagenome RepID=T0Y1R8_9ZZZZ
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
ERMGT500_2_curated_scaffold_55_2
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

296..697
-----------------
DNA (402bp)
protein (134aa)
Integrase, catalytic region n=1 Tax=mine drainage metagenome RepID=T1BLU6_9ZZZZ
integrase family protein
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
ERMGT500_2_curated_scaffold_55_3
unknown

Not on your lists

854..964
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_55_4
GWA2_Elusimicrobia_51_34_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1116..2114)
-----------------
DNA (999bp)
protein (333aa)
NAD-dependent epimerase/dehydratase id=4685378 bin=GWA2_Elusimicrobia_51_34 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase
Tax=GWA2_Elusimicrobia_51_34_curated
ERMGT500_2_curated_scaffold_55_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2241..3602
-----------------
DNA (1362bp)
protein (454aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJG9_THIDA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT500_2_curated_scaffold_55_6
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3722..5239
-----------------
DNA (1518bp)
protein (506aa)
Polysaccharide biosynthesis protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125A3_POLSJ
polysaccharide biosynthesis protein
Tax=BJP_08E140C01_Dechloromonas_61_78
ERMGT500_2_curated_scaffold_55_7

Not on your lists

5236..6084
-----------------
DNA (849bp)
protein (283aa)
Uncharacterized protein n=3 Tax=mine drainage metagenome RepID=T0YWG1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD37378.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
ERMGT500_2_curated_scaffold_55_8
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6126..7169
-----------------
DNA (1044bp)
protein (348aa)
Glycosyl transferase, family 2 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125A6_POLSJ
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABE45886.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
ERMGT500_2_curated_scaffold_55_9
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7144..8151
-----------------
DNA (1008bp)
protein (336aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QNY2_METS6
gmd; dTDP-glucose 4,6-dehydratase
Tax=GWA2_Curvibacter_64_110_curated
ERMGT500_2_curated_scaffold_55_10
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8190..9422
-----------------
DNA (1233bp)
protein (411aa)
NDP-hexose 3-C-methyltransferase TylCIII n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125A7_POLSJ
NDP-hexose 3-C-methyltransferase TylCIII
Tax=BJP_08E140C01_Dechloromonas_61_78
ERMGT500_2_curated_scaffold_55_11
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

comp(9454..10269)
-----------------
DNA (816bp)
protein (272aa)
Glycosyl transferase family 2 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQ89_SIDLE
glycosyl transferase family 2
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
ERMGT500_2_curated_scaffold_55_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10304..10900)
-----------------
DNA (597bp)
protein (199aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN84_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09804.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
ERMGT500_2_curated_scaffold_55_13
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10927..11766)
-----------------
DNA (840bp)
protein (280aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039F1345
cell wall biogenesis glycosyltransferase
Tax=RBG_16_Betaproteobacteria_56_24_curated
ERMGT500_2_curated_scaffold_55_14
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11776..12630)
-----------------
DNA (855bp)
protein (285aa)
Glycosyl transferase family 2 n=1 Tax=uncultured bacterium RepID=K2DTD9_9BACT
glycosyltransferase
Tax=CG_Rhodof_01
ERMGT500_2_curated_scaffold_55_15
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12787..13650)
-----------------
DNA (864bp)
protein (288aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQB5_SIDLE
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
ERMGT500_2_curated_scaffold_55_16
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13647..14186)
-----------------
DNA (540bp)
protein (180aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JRA1_PSEST
dTDP-4-dehydrorhamnose 3,5-epimerase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT500_2_curated_scaffold_55_17
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14183..15070)
-----------------
DNA (888bp)
protein (296aa)
glucose-1-phosphate thymidylyltransferase n=1 Tax=Azoarcus toluclasticus RepID=UPI00037842E3
glucose-1-phosphate thymidylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_55_18
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15067..16137)
-----------------
DNA (1071bp)
protein (357aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B8Q0_9PROT
ERMGT500_2_curated_scaffold_55_19
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16166..16912)
-----------------
DNA (747bp)
protein (249aa)
Glycosyl transferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AP95_9PROT
glycosyl transferase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_55_20
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17022..18272
-----------------
DNA (1251bp)
protein (417aa)
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SDY2_GALCS
three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_55_21
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18285..19619)
-----------------
DNA (1335bp)
protein (445aa)
Type I secretion outer membrane protein, TolC family n=1 Tax=Azoarcus sp. KH32C RepID=H0PT19_9RHOO
TolC family type I secretion outer membrane protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_55_22
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19648..20313)
-----------------
DNA (666bp)
protein (222aa)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFJ7_9PROT
protein-L-isoaspartate(D-aspartate) O-methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_55_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20379..21512)
-----------------
DNA (1134bp)
protein (378aa)
ABC-2 protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q127C9_POLSJ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT500_2_curated_scaffold_55_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21509..22447)
-----------------
DNA (939bp)
protein (313aa)
ABC-type multidrug transport system n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAY9_MAGSA
ABC-type multidrug transport system
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT500_2_curated_scaffold_55_25
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22444..23388)
-----------------
DNA (945bp)
protein (315aa)
Secretion protein HlyD family protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AZU6_9PROT
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:BAN34027.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
ERMGT500_2_curated_scaffold_55_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23729..24115
-----------------
DNA (387bp)
protein (129aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037EF03B
anti-anti-sigma regulatory factor, SpoIIAA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMGT500_2_curated_scaffold_55_27
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24119..25084
-----------------
DNA (966bp)
protein (322aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000378C54F
beta-lactamase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
ERMGT500_2_curated_scaffold_55_28
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25168..27231
-----------------
DNA (2064bp)
protein (688aa)
Putative chase2 sensor protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PD84_9BURK
stage II sporulation E family protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
ERMGT500_2_curated_scaffold_55_29
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27240..27836)
-----------------
DNA (597bp)
protein (199aa)
OmpA/MotB domain protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T4H7_BURPP
OmpA/MotB domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
ERMGT500_2_curated_scaffold_55_30
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27850..28305)
-----------------
DNA (456bp)
protein (152aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PB73_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Displaying items 1-30 of 80 in total

View Taxonomy