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ERMGT800_2_curated_scaffold_112

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT800_2_curated_scaffold_112_1
unknown

Not on your lists

comp(2..76)
-----------------
DNA (75bp)
protein (25aa)
ABC transporter permease
ERMGT800_2_curated_scaffold_112_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170..958)
-----------------
DNA (789bp)
protein (263aa)
ABC transporter ATP-binding protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KB56_AZOSB
ABC transporter ATP-binding protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_112_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(955..2907)
-----------------
DNA (1953bp)
protein (651aa)
AMP-forming long-chain acyl-CoA synthetase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK77_AZOSU
AMP-dependent synthetase/ligase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_112_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3017..3958)
-----------------
DNA (942bp)
protein (314aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGT5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60856.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
ERMGT800_2_curated_scaffold_112_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4003..7383)
-----------------
DNA (3381bp)
protein (1127aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RL21_ACCPU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT800_2_curated_scaffold_112_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7495..8853)
-----------------
DNA (1359bp)
protein (453aa)
beta-Casp domain-containing protein n=1 Tax=Methylotenera mobilis RepID=UPI000368773D
beta-lactamase domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ERMGT800_2_curated_scaffold_112_7
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8903..11203)
-----------------
DNA (2301bp)
protein (767aa)
Lead, cadmium, zinc and mercury transporting ATPase {ECO:0000313|EMBL:ESR23974.1}; EC=3.6.3.3 {ECO:0000313|EMBL:ESR23974.1};; EC=3.6.3.4 {ECO:0000313|EMBL:ESR23974.1};; EC=3.6.3.5 {ECO:0000313|EMBL:ESR23974.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
actP; copper-transporting P-type ATPase (EC:3.6.3.4)
Lead, cadmium, zinc and mercury transporting ATPase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RF32_9RHIZ
ERMGT800_2_curated_scaffold_112_8
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11240..13090)
-----------------
DNA (1851bp)
protein (617aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Nitrosospira sp. APG3 RepID=M5DX90_9PROT
glucosamine/fructose-6-phosphate aminotransferase, isomerizing
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT800_2_curated_scaffold_112_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13107..14465)
-----------------
DNA (1359bp)
protein (453aa)
GLMU; UDP-N-acetylglucosamine pyrophosphorylase protein (EC:2.7.7.23)
glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DF33DA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT800_2_curated_scaffold_112_10
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14604..15140
-----------------
DNA (537bp)
protein (179aa)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT800_2_curated_scaffold_112_11
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15160..16635)
-----------------
DNA (1476bp)
protein (492aa)
gltD; glutamate synthase (EC:1.4.1.13)
Glutamate synthase subunit beta n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WVR5_9BURK
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT800_2_curated_scaffold_112_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16660..21321)
-----------------
DNA (4662bp)
protein (1554aa)
glutamate synthase (EC:1.4.7.1)
Glutamate synthase (Ferredoxin) n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TBA3_BURSG
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT800_2_curated_scaffold_112_13
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21480..22562)
-----------------
DNA (1083bp)
protein (361aa)
3-dehydroquinate synthase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPC8_ACCPU
aroB; 3-dehydroquinate synthase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT800_2_curated_scaffold_112_14
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22544..23077)
-----------------
DNA (534bp)
protein (178aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13TL5_BURXL
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT800_2_curated_scaffold_112_15
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23167..25302)
-----------------
DNA (2136bp)
protein (712aa)
Putative type IV pilus biogenesis secretin PilQ n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RCD9_9RHOO
pilM; fimbrial biogenesis protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT800_2_curated_scaffold_112_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25302..25829)
-----------------
DNA (528bp)
protein (176aa)
pilus assembly protein PilP n=1 Tax=Thiobacillus thioparus RepID=UPI000365AAD1
Tfp pilus assembly protein PilP
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_112_17
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25826..26464)
-----------------
DNA (639bp)
protein (213aa)
Pilus assembly protein PilO n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPD2_ACCPU
Pilus assembly protein PilO
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT800_2_curated_scaffold_112_18
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26471..27082)
-----------------
DNA (612bp)
protein (204aa)
Probable type 4 fimbrial biogenesis protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KBQ9_AZOSB
pilN; type 4 fimbrial biogenesis protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT800_2_curated_scaffold_112_19
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27079..28107)
-----------------
DNA (1029bp)
protein (343aa)
Type IV pilus assembly protein PilM n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JL2_DECAR
Type IV pilus assembly protein PilM
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT800_2_curated_scaffold_112_20
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28334..30634
-----------------
DNA (2301bp)
protein (767aa)
Penicillin-binding protein, 1A family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKY3_AZOSU
penicillin-binding protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_112_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30700..31023)
-----------------
DNA (324bp)
protein (108aa)
Protein CyaY n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKY1_AZOSU
iron donor protein CyaY
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT800_2_curated_scaffold_112_22
unknown

Not on your lists

31061..31192
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

ERMGT800_2_curated_scaffold_112_23
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31189..32433
-----------------
DNA (1245bp)
protein (415aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AZU0_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT800_2_curated_scaffold_112_24
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

32633..33811
-----------------
DNA (1179bp)
protein (393aa)
Efflux transporter, RND family, MFP subunit id=3720835 bin=GWC2_Nitrospirae_57_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RND family efflux transporter MFP subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ERMGT800_2_curated_scaffold_112_25
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33808..36978
-----------------
DNA (3171bp)
protein (1057aa)
Acriflavin resistance protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G432_GEOUR
acriflavin resistance protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT800_2_curated_scaffold_112_26
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37099..37839)
-----------------
DNA (741bp)
protein (247aa)
Uncharacterized protein id=1941195 bin=GWD2_Deltaproteobacteria_55_8 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
transmembrane transcriptional regulator
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_112_27
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37836..38333)
-----------------
DNA (498bp)
protein (166aa)
Sigma-70 region 2:Sigma-70 region 4 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IQ3_DECAR
sigma-70 region 2:sigma-70 region 4
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_112_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38710..39342)
-----------------
DNA (633bp)
protein (211aa)
Cytochrome c553 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMC6_AZOSU
cytochrome c553
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT800_2_curated_scaffold_112_29
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39411..40031
-----------------
DNA (621bp)
protein (207aa)
cell division checkpoint GTPase YihA; K03978 GTP-binding protein id=12495857 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
engB; ribosome biogenesis GTP-binding protein YsxC
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_112_30
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40225..41232
-----------------
DNA (1008bp)
protein (336aa)
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTH3_SIDLE
Tax=RBG_16_Betaproteobacteria_64_18_curated
Displaying items 1-30 of 37 in total

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