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ERMGT800_2_curated_scaffold_197

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT800_2_curated_scaffold_197_1
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3..1001
-----------------
DNA (999bp)
protein (333aa)
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18); K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] id=12497119 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:AKH36915.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
Succinyl-diaminopimelate desuccinylase
ERMGT800_2_curated_scaffold_197_2
unknown

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comp(861..1169)
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

ERMGT800_2_curated_scaffold_197_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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1248..1928
-----------------
DNA (681bp)
protein (227aa)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (EC:2.1.1.72); K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] id=12497120 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT800_2_curated_scaffold_197_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1983..3455
-----------------
DNA (1473bp)
protein (491aa)
UbiD family decarboxylases n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11E77_MESSB
UbiD family decarboxylase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_197_trna_1
unknown

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3522..3594
-----------------
DNA (73bp)
transferRNA His
ERMGT800_2_curated_scaffold_197_5
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3623..4327)
-----------------
DNA (705bp)
protein (235aa)
Glutathione S-transferase with thioredoxin-like domain n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8NSE2_RALSL
glutathione s-transferase protein
Glutathione s-transferase protein {ECO:0000313|EMBL:AEG68713.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain Po82).;"
ERMGT800_2_curated_scaffold_197_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4547..5470)
-----------------
DNA (924bp)
protein (308aa)
Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T187_JANMA
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT800_2_curated_scaffold_197_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5648..6919
-----------------
DNA (1272bp)
protein (424aa)
Integral membrane protein TerC n=1 Tax=beta proteobacterium CB RepID=M1RR51_9PROT
Integral membrane protein TerC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT800_2_curated_scaffold_197_trna_3
unknown

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comp(6993..7067)
-----------------
DNA (75bp)
transferRNA Arg
ERMGT800_2_curated_scaffold_197_trna_2
unknown

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comp(7132..7205)
-----------------
DNA (74bp)
transferRNA Pro
ERMGT800_2_curated_scaffold_197_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7343..7762
-----------------
DNA (420bp)
protein (140aa)
molecular chaperone DnaK n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI0003708881
RNA polymerase-binding protein DksA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT800_2_curated_scaffold_197_9
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7943..10054)
-----------------
DNA (2112bp)
protein (704aa)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKK3_9PROT
polynucleotide phosphorylase/polyadenylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT800_2_curated_scaffold_197_10
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10187..10456)
-----------------
DNA (270bp)
protein (90aa)
30S ribosomal protein S15 n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000380D996
30S ribosomal protein S15
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT800_2_curated_scaffold_197_11
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10543..11442)
-----------------
DNA (900bp)
protein (300aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.-)
tRNA pseudouridine synthase B n=1 Tax=Burkholderia pseudomallei Pasteur 52237 RepID=A8KMT7_BURPE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT800_2_curated_scaffold_197_12
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11448..11813)
-----------------
DNA (366bp)
protein (122aa)
Ribosome-binding factor A n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAA8_9PROT
rbfA; ribosome-binding factor A
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT800_2_curated_scaffold_197_13
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11918..14416)
-----------------
DNA (2499bp)
protein (833aa)
Translation initiation factor IF-2 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK83_9PROT
infB; translation initiation factor IF-2
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT800_2_curated_scaffold_197_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14427..15908)
-----------------
DNA (1482bp)
protein (494aa)
Transcription termination factor NusA n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPW3_AZOSU
transcription termination factor NusA
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_197_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15922..16380)
-----------------
DNA (459bp)
protein (153aa)
Ribosome maturation factor RimP n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5AQT1_BURRH
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_197_16
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16527..17252)
-----------------
DNA (726bp)
protein (242aa)
Pseudouridine synthase n=3 Tax=Thauera RepID=C4ZJR2_THASP
ribosomal large subunit pseudouridine synthase B
Tax=BJP_IG2103_Rhodocyclales_63_50
ERMGT800_2_curated_scaffold_197_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17335..17925)
-----------------
DNA (591bp)
protein (197aa)
Chromosome segregation and condensation protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R1E8_CUPTR
scpB; chromosome segregation and condensation protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_197_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17909..18727)
-----------------
DNA (819bp)
protein (273aa)
Segregation and condensation protein A n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FQG0_BURVI
scpA/B family protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_197_19
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18724..19926)
-----------------
DNA (1203bp)
protein (401aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AGX7_9PROT
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_197_20
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19936..20604)
-----------------
DNA (669bp)
protein (223aa)
Peptidase M50 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA61_9PROT
peptidase M50
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
ERMGT800_2_curated_scaffold_197_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20661..21488)
-----------------
DNA (828bp)
protein (276aa)
Phosphoesterase n=1 Tax=Ralstonia sp. AU12-08 RepID=S9TIC5_9RALS
conserved protein of unknown function, PHP domain-like
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT800_2_curated_scaffold_197_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21635..22543)
-----------------
DNA (909bp)
protein (303aa)
alpha/beta hydrolase n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002FAEA04
alpha/beta hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT800_2_curated_scaffold_197_23
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22574..23104
-----------------
DNA (531bp)
protein (177aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI0003620CF0
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT800_2_curated_scaffold_197_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23172..23996
-----------------
DNA (825bp)
protein (275aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S4H8_9BURK
Tricarboxylate transport protein TctC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying 27 items

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