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ERMGT800_2_curated_scaffold_927

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT800_2_curated_scaffold_927_1
Sphingopyxis macrogoltabida, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..200
-----------------
DNA (198bp)
protein (66aa)
Rieske-type ferredoxin n=1 Tax=Sphingopyxis macrogoltabida RepID=Q9RPJ6_SPHMC
Rieske-type ferredoxin {ECO:0000313|EMBL:AAD52963.2}; TaxID=33050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis macrogoltabida (Sphingomonas macrogoltabidus).;"
Rieske (2Fe-2S) domain-containing protein
ERMGT800_2_curated_scaffold_927_trna_1
unknown

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comp(253..325)
-----------------
DNA (73bp)
transferRNA Lys
ERMGT800_2_curated_scaffold_927_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(394..1509)
-----------------
DNA (1116bp)
protein (372aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036A7D7F
YeeE/YedE
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_927_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1544..2332)
-----------------
DNA (789bp)
protein (263aa)
Tol-Pal cell envelope complex subunit YbgF protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8INR2_HERSS
ybgF; Tol-Pal cell envelope complex subunit YbgF protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_927_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2436..2957)
-----------------
DNA (522bp)
protein (174aa)
OmpA/MotB domain-containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AKC9_9PROT
OmpA/MotB domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT800_2_curated_scaffold_927_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2971..4251)
-----------------
DNA (1281bp)
protein (427aa)
Protein TolB n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABB2_9PROT
tolB; translocation protein TolB
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_927_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4274..4996)
-----------------
DNA (723bp)
protein (241aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036C0D3A
TonB, C-terminal
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_927_7
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4993..5403)
-----------------
DNA (411bp)
protein (137aa)
Protein TolR n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AF68_9PROT
biopolymer transporter ExbD
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT800_2_curated_scaffold_927_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5400..6086)
-----------------
DNA (687bp)
protein (229aa)
Protein TolQ n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPG3_ACCPU
protein TolQ
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_927_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6083..6505)
-----------------
DNA (423bp)
protein (141aa)
Tol-pal system-associated acyl-CoA thioesterase id=1993493 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
tol-pal system-associated acyl-CoA thioesterase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_927_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6502..7521)
-----------------
DNA (1020bp)
protein (340aa)
Holliday junction ATP-dependent DNA helicase RuvB n=5 Tax=Ralstonia RepID=RUVB_RALPJ
ruvB; Holliday junction DNA helicase RuvB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT800_2_curated_scaffold_927_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7571..8152)
-----------------
DNA (582bp)
protein (194aa)
Holliday junction DNA helicase RuvA n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F5BEA4
ruvA; RuvA holliday junction DNA helicase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_927_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8217..8750)
-----------------
DNA (534bp)
protein (178aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMR6_SIDLE
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_927_13
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8787..9518)
-----------------
DNA (732bp)
protein (244aa)
Probable transcriptional regulatory protein EBAPG3_9170 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHP1_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT800_2_curated_scaffold_927_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9612..10565
-----------------
DNA (954bp)
protein (318aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHF2_AZOL4
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT800_2_curated_scaffold_927_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10588..11367
-----------------
DNA (780bp)
protein (260aa)
Short-chain dehydrogenase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KNT4_9BURK
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_927_16
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11447..13234
-----------------
DNA (1788bp)
protein (596aa)
Integral membrane protein-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02D09_SOLUE
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_64_85_curated
Displaying 17 items

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