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ERMGT100_2_curated_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_24_1
unknown

Not on your lists

2..73
-----------------
DNA (72bp)
protein (24aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_24_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250..3006)
-----------------
DNA (2757bp)
protein (919aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y672_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40334.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
ERMGT100_2_curated_scaffold_24_3
unknown

Not on your lists

3821..4204
-----------------
DNA (384bp)
protein (128aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_24_4
unknown

Not on your lists

4413..4748
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_24_5
RLO_PLX_64_10, Bacteria

Not on your lists

comp(4808..5884)
-----------------
DNA (1077bp)
protein (359aa)
Multicopper oxidase type 3 n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7RAY6_KANKD
multicopper oxidase type 3
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
ERMGT100_2_curated_scaffold_24_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6250..8559)
-----------------
DNA (2310bp)
protein (770aa)
id=24489023 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
histidine kinase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_24_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8556..10982)
-----------------
DNA (2427bp)
protein (809aa)
hypothetical protein id=24490875 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMGT100_2_curated_scaffold_24_8
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(11003..13735)
-----------------
DNA (2733bp)
protein (911aa)
Uncharacterized protein {ECO:0000313|EMBL:KER10161.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
BNR/Asp-box repeat domain protein id=3854585 bin=GWF2_Bacteroidetes_38_335 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
ERMGT100_2_curated_scaffold_24_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

14059..16551
-----------------
DNA (2493bp)
protein (831aa)
hypothetical protein id=24473773 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_24_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(16576..17355)
-----------------
DNA (780bp)
protein (260aa)
Short chain dehydrogenase protein id=2937741 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobiaceae bacterium SG-6C genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short chain dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
ERMGT100_2_curated_scaffold_24_11
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(17442..18950)
-----------------
DNA (1509bp)
protein (503aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000375F3C6
AMP-dependent synthetase/ligase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
ERMGT100_2_curated_scaffold_24_12
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(18980..19207)
-----------------
DNA (228bp)
protein (76aa)
acyl carrier protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000363F0A9
hypothetical protein
Tax=GWC2_Nitrospirae_57_9_curated
ERMGT100_2_curated_scaffold_24_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19237..20298)
-----------------
DNA (1062bp)
protein (354aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBG3_9RHIZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMGT100_2_curated_scaffold_24_14
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(20295..22031)
-----------------
DNA (1737bp)
protein (579aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50CC
Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
ERMGT100_2_curated_scaffold_24_15
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

Not on your lists

22102..23646
-----------------
DNA (1545bp)
protein (515aa)
Gll3854 protein id=3436166 bin=GWC2_Elusimicrobia_64_44 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
O-antigen and teichoic acid-like export protein
Tax=GWC2_Elusimicrobia_64_44_curated
ERMGT100_2_curated_scaffold_24_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

23743..23985
-----------------
DNA (243bp)
protein (81aa)
alias=16ft_combo_ws3_scaffold_136_7 id=24437386 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_24_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

23992..24504
-----------------
DNA (513bp)
protein (171aa)
nudF; ADP-ribose pyrophosphatase (EC:3.6.1.13)
ADP-ribose pyrophosphatase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA39_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ERMGT100_2_curated_scaffold_24_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

24585..25433
-----------------
DNA (849bp)
protein (283aa)
Putative enzyme with alpha/beta-hydrolase domain; putative triacylglycerol lipase (Esterase) n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YW76_BRASO id=5223178 bin=16ft_combo_ws3_JS1 species=Bradyrhizobium sp. genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
alpha/beta hydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_24_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

25477..26349
-----------------
DNA (873bp)
protein (291aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. SJCon RepID=L8TQP1_9MICC id=5225926 bin=16ft_combo_ws3_JS1 species=Arthrobacter sp. SJCon genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
DMT superfamily drug/metaboltie permease
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_24_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

26661..28373
-----------------
DNA (1713bp)
protein (571aa)
hypothetical protein id=24524032 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Gingipain R
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMGT100_2_curated_scaffold_24_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

28370..30028
-----------------
DNA (1659bp)
protein (553aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D115_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20027.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative glycosyl hydrolase
ERMGT100_2_curated_scaffold_24_22
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

30063..31334
-----------------
DNA (1272bp)
protein (424aa)
Biotin carboxylase-like protein n=3 Tax=Anaeromyxobacter RepID=Q2IKM8_ANADE id=5224888 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_24_23
CSP1_5_NC10, NC10, Bacteria

Not on your lists

31328..31921
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein id=14429539 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
ERMGT100_2_curated_scaffold_24_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

31899..33278
-----------------
DNA (1380bp)
protein (460aa)
Radical SAM domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SL8_SOLUE id=5224886 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
radical SAM domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_24_25
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33435..33860
-----------------
DNA (426bp)
protein (142aa)
OsmC subfamily peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:AEF20221.1}; EC=1.11.1.15 {ECO:0000313|EMBL:AEF20221.1};; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (strain 12-X).;"
Peroxiredoxin, OsmC subfamily n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AF23_PSEF1
ERMGT100_2_curated_scaffold_24_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33857..37078)
-----------------
DNA (3222bp)
protein (1074aa)
hypothetical protein id=24657152 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23304.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).;"
ERMGT100_2_curated_scaffold_24_27
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37258..39279
-----------------
DNA (2022bp)
protein (674aa)
TonB-dependent receptor n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SJK8_GALCS
TonB-dependent receptor
Tax=GWA2_Gallionellales_54_124_curated
ERMGT100_2_curated_scaffold_24_28
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(39355..42306)
-----------------
DNA (2952bp)
protein (984aa)
Cell surface protein id=2293110 bin=GWB2_Ignavibacteria_35_12 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
ERMGT100_2_curated_scaffold_24_29
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

42690..45452
-----------------
DNA (2763bp)
protein (921aa)
2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPJ8_SINAD id=5224876 bin=16ft_combo_ws3_JS1 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_24_30
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

45449..46762
-----------------
DNA (1314bp)
protein (438aa)
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5T5_SPHTD id=5224875 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 1-30 of 59 in total

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