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ERMGT100_2_curated_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_118_1
unknown

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117..896
DNA (780bp) protein (260aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_118_2
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1042..2601
DNA (1560bp) protein (520aa)
UPI0003CE406F related cluster n=1 Tax=unknown RepID=UPI0003CE406F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM59890.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
ERMGT100_2_curated_scaffold_118_3
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2744..3562
DNA (819bp) protein (273aa)
UPI0003CF69A9 related cluster n=1 Tax=unknown RepID=UPI0003CF69A9
putative chromosome partitioning protein
Putative chromosome partitioning protein {ECO:0000313|EMBL:CDM59889.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
ERMGT100_2_curated_scaffold_118_4
unknown

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3641..3742
DNA (102bp) protein (34aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_118_5
unknown

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comp(3797..4276)
DNA (480bp) protein (160aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_118_6
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

4331..6091
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YT69_9ALTE
amidohydrolase
Tax=RBG_13_Acidobacteria_68_16_curated
ERMGT100_2_curated_scaffold_118_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6214..6756
DNA (543bp) protein (181aa)
MerR family transcriptional regulator id=24509603 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6778..7140
DNA (363bp) protein (121aa)
iscA; iron-sulfur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein id=24509604 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
iscA; iron-sulfur cluster assembly protein IscA
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

7205..8002
DNA (798bp) protein (266aa)
sufC; putative ATP-dependent transporter SufC; K09013 Fe-S cluster assembly ATP-binding protein id=24509605 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
sufC; putative ATP-dependent transporter SufC
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

7999..9414
DNA (1416bp) protein (472aa)
FeS assembly protein SufB n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3Z1_SPHTD id=5223957 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
sufB; protein SufB
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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9411..10763
DNA (1353bp) protein (451aa)
FeS assembly protein SufD n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY36_THERP id=5223956 bin=16ft_combo_ws3_JS1 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
sufD: FeS assembly protein SufD
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

10768..12030
DNA (1263bp) protein (421aa)
Cysteine desulfurase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3Z3_SPHTD id=5223955 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative cysteine desulfurase/selenocysteine lyase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

12027..12422
DNA (396bp) protein (132aa)
NifU family SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins id=24509609 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
NifU family SUF system FeS assembly protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

12419..13192
DNA (774bp) protein (258aa)
Serine O-acetyltransferase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SPH3_9CHLR id=5223952 bin=16ft_combo_ws3_JS1 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13315..13908
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035D2884
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92494.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMGT100_2_curated_scaffold_118_16
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(13820..14245)
DNA (426bp) protein (142aa)
Rhodanese domain protein id=3659571 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
rhodanese domain-containing protein
Tax=GWB1_Bdellovibrionales_55_8_curated
ERMGT100_2_curated_scaffold_118_17
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14423..15334
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000364220E
putative integral membrane protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
ERMGT100_2_curated_scaffold_118_18
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

15348..17177
DNA (1830bp) protein (610aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] id=14430250 bin=bin3_NC10 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
ERMGT100_2_curated_scaffold_118_19
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

17174..17953
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003651092
fumarate reductase iron-sulfur subunit
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
ERMGT100_2_curated_scaffold_118_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(17987..18724)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTZ6_HALO1 id=5223669 bin=16ft_combo_ws3_JS1 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_21
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(18942..19574)
DNA (633bp) protein (211aa)
alias=16ft_combo_ws3_scaffold_1480_11 id=24542535 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_22
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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19749..20375
DNA (627bp) protein (209aa)
id=5223928 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_23
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

20386..20784
DNA (399bp) protein (133aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
NUDIX hydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023P3_SOLUE id=5223927 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_24
unknown

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20784..20981
DNA (198bp) protein (66aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_118_25
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

21058..21882
DNA (825bp) protein (275aa)
hypothetical protein id=109183 bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_26
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

21921..22499
DNA (579bp) protein (193aa)
LemA id=3259669 bin=GWA1_Deltaproteobacteria_52_35 species=Methylobacillus flagellatus genus=Methylobacillus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
LemA family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_27
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(22483..24936)
DNA (2454bp) protein (818aa)
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53)
Lon protease id=4686851 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_28
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(25035..25475)
DNA (441bp) protein (147aa)
Heat shock protein Hsp20 family protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XNV7_DESMR
heat shock protein Hsp20 family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_29
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(25575..26900)
DNA (1326bp) protein (442aa)
Beta-glucosidase B (EC:3.2.1.21)
Beta-glucosidase B n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q091M8_STIAD
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_118_30
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

26970..28028
DNA (1059bp) protein (353aa)
pdh; phenylalanine dehydrogenase (EC:1.4.1.20)
Phenylalanine dehydrogenase n=1 Tax=Rhodococcus erythropolis DN1 RepID=T5I6K2_RHOER
Tax=RBG_16_Chloroflexi_54_18_curated
Displaying items 1-30 of 33 in total

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