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ERMGT100_2_curated_scaffold_222

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_222_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1..156)
-----------------
DNA (156bp)
protein (52aa)
alias=16ft_combo_ws3_scaffold_10219_12 id=24566576 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_222_2
unknown

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416..1222
-----------------
DNA (807bp)
protein (269aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_222_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1330..2157
-----------------
DNA (828bp)
protein (276aa)
Alpha/beta hydrolase fold protein n=1 Tax=Alkalilimnicola ehrlichei (strain MLHE-1) RepID=Q0A5Z3_ALHEH id=5223176 bin=16ft_combo_ws3_JS1 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
bioH protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_222_4
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(2159..3346)
-----------------
DNA (1188bp)
protein (396aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AWI7_HERA2
multi-sensor signal transduction histidine kinase
ERMGT100_2_curated_scaffold_222_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3478..3759)
-----------------
DNA (282bp)
protein (94aa)
hupB; transcriptional dual regulator HU-beta; K03530 DNA-binding protein HU-beta id=24566571 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hupB; transcriptional dual regulator HU-beta
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_222_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3952..6513)
-----------------
DNA (2562bp)
protein (854aa)
BNR/Asp-box repeat protein id=4518335 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_222_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(6554..9148)
-----------------
DNA (2595bp)
protein (865aa)
BNR/Asp-box repeat protein id=3615630 bin=GWF2_Bacteroidetes_43_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
BNR/Asp-box repeat-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_222_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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9304..10668
-----------------
DNA (1365bp)
protein (455aa)
aspartate kinase III (EC:2.7.2.4)
Aspartokinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INQ8_KORVE id=5223171 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_222_9

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10761..11534
-----------------
DNA (774bp)
protein (258aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=uncultured bacterium 59 RepID=E3T6H2_9BACT
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADC35916.1}; TaxID=698390 species="Bacteria; environmental samples.;" source="uncultured bacterium 59.;"
glyoxalase
ERMGT100_2_curated_scaffold_222_10
unknown

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comp(11375..11725)
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_222_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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11769..12410
-----------------
DNA (642bp)
protein (214aa)
Transcriptional regulator n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C2F5_DESTA
transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMGT100_2_curated_scaffold_222_12
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

12424..13569
-----------------
DNA (1146bp)
protein (382aa)
Efflux pump, RND family, membrane fusion protein id=1718177 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
RND family efflux pump membrane fusion protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
ERMGT100_2_curated_scaffold_222_13
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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13571..16510
-----------------
DNA (2940bp)
protein (980aa)
acriflavine resistance protein B n=1 Tax=Variovorax paradoxus RepID=UPI0003640C2C
Acriflavine resistance protein B {ECO:0000313|EMBL:KIA79016.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
RND family efflux pump inner membrane protein
ERMGT100_2_curated_scaffold_222_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(16557..17168)
-----------------
DNA (612bp)
protein (204aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NF2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88818.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMGT100_2_curated_scaffold_222_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(17180..18502)
-----------------
DNA (1323bp)
protein (441aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NL56_ROSCS id=5223169 bin=16ft_combo_ws3_JS1 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_222_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(18499..19884)
-----------------
DNA (1386bp)
protein (462aa)
hypothetical protein id=14625310 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
ERMGT100_2_curated_scaffold_222_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(19926..23174)
-----------------
DNA (3249bp)
protein (1083aa)
Putative uncharacterized protein id=2287911 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Calx-beta domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_222_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(23244..24272)
-----------------
DNA (1029bp)
protein (343aa)
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK52_9BACT id=5224712 bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
alcohol dehydrogenase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_222_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(24269..25120)
-----------------
DNA (852bp)
protein (284aa)
Hypothetical conserved protein n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SBH2_9CHLR id=5224711 bin=16ft_combo_ws3_JS1 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ParB-like nuclease domain
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_222_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(25152..27035)
-----------------
DNA (1884bp)
protein (628aa)
hypothetical protein id=24490461 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_222_21
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(27082..28200)
-----------------
DNA (1119bp)
protein (373aa)
Deoxyhypusine synthase n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLS6_GLOVI id=5224706 bin=16ft_combo_ws3_JS1 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
deoxyhypusine synthase-like protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_222_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

28288..29202
-----------------
DNA (915bp)
protein (305aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N502_ANATU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMGT100_2_curated_scaffold_222_23
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

29211..30749
-----------------
DNA (1539bp)
protein (513aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI000369ED1A
peptidase dimerization
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMGT100_2_curated_scaffold_222_24
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

30746..31258
-----------------
DNA (513bp)
protein (171aa)
Uncharacterized protein n=1 Tax=Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202) RepID=K9YIE6_CYASC
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
ERMGT100_2_curated_scaffold_222_25
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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31457..32308
-----------------
DNA (852bp)
protein (284aa)
Conserved hypothetical signal peptide protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM79_KORVE
signal peptide protein
Tax=RBG_16_Acidobacteria_70_10_curated
ERMGT100_2_curated_scaffold_222_26
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

32340..35477
-----------------
DNA (3138bp)
protein (1046aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKN3_CHLTF
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
ERMGT100_2_curated_scaffold_222_27
unknown

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comp(35557..35955)
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_222_28
unknown

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comp(36384..36551)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

Displaying 28 items

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