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ERMGT100_2_curated_scaffold_652

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_652_1
unknown

Not on your lists

comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_652_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(142..1215)
DNA (1074bp) protein (358aa)
Phytoene synthase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N1G8_CORCM
crtB1; phytoene synthase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_652_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1302..2267
DNA (966bp) protein (322aa)
ctaA; cytochrome oxidase assembly protein; K02259 cytochrome c oxidase assembly protein subunit 15 id=24489203 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Leptospira inadai genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ctaA; cytochrome oxidase assembly protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_652_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2264..3166
DNA (903bp) protein (301aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] id=24489204 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_652_trna_1
unknown

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comp(3277..3350)
DNA (74bp)
transferRNA Met
ERMGT100_2_curated_scaffold_652_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

3498..4265
DNA (768bp) protein (256aa)
id=24407669 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_652_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4392..4751)
DNA (360bp) protein (120aa)
id=24407670 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_652_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4809..6116)
DNA (1308bp) protein (436aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] id=24407671 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfotomaculum nigrificans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Enolase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_652_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6280..6846
DNA (567bp) protein (189aa)
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24407672 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
sigma-70 family RNA polymerase sigma factor
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_652_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6843..7466
DNA (624bp) protein (208aa)
id=24407673 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_652_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

7444..8640
DNA (1197bp) protein (399aa)
hypothetical protein id=24407675 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Halogranum salarium genus=Halogranum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_652_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

8646..9284
DNA (639bp) protein (213aa)
hypothetical protein id=24519525 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Pseudoalteromonas rubra genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_652_12
unknown

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9297..9752
DNA (456bp) protein (152aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_652_13
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

9804..11555
DNA (1752bp) protein (584aa)
amidohydrolase 3; K07047 id=16802519 bin=RBG_16_Aminicenantes_63_16_plus tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
amidohydrolase 3
Tax=RBG_16_Aminicenantes_63_16_curated
ERMGT100_2_curated_scaffold_652_14
unknown

Not on your lists

11871..11987
DNA (117bp) protein (39aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_652_15
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(11962..12075)
DNA (114bp) protein (38aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4A0_ANATU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ63264.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Displaying 16 items

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