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ERMGT100_2_curated_scaffold_2024

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_2024_1
R_RIF_OD1_11_46_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1..630)
-----------------
DNA (630bp)
protein (210aa)
ATP synthase gamma chain n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4DCD7_DESAJ
ATP synthase F1 subcomplex gamma subunit
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_46_13_curated
ERMGT100_2_curated_scaffold_2024_2
R_RIF_OD1_11_51_15, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(668..2221)
-----------------
DNA (1554bp)
protein (518aa)
ATP synthase F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha id=2008904 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_51_15_curated
ERMGT100_2_curated_scaffold_2024_3
unknown

Not on your lists

comp(2232..2603)
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_2024_4
GWA1_OD1_48_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2600..3106)
-----------------
DNA (507bp)
protein (169aa)
ATP synthase subunit b n=1 Tax=uncultured bacterium RepID=K2FKY1_9BACT
ATP synthase subunit b {ECO:0000313|EMBL:KKU93889.1}; TaxID=1618661 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_13.;"
atpF; ATP synthase subunit b
ERMGT100_2_curated_scaffold_2024_5
R_RIF_OD1_11_45_35, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3148..3366)
-----------------
DNA (219bp)
protein (73aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ENX7_9BACT
atpE; ATP synthase subunit c
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_45_35_curated
ERMGT100_2_curated_scaffold_2024_6
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists

comp(3473..4216)
-----------------
DNA (744bp)
protein (248aa)
ATP synthase F0, A subunit; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] id=86501 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
ATP synthase subunit a {ECO:0000313|EMBL:KKW21064.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
ATP synthase F0 subunit A
ERMGT100_2_curated_scaffold_2024_7
R_OD1_48_18, Parcubacteria, Bacteria

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comp(4224..4478)
-----------------
DNA (255bp)
protein (85aa)
transmembrane_regions id=5801238 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tax=RIFCSPLOWO2_01_FULL_OD1_48_18_curated
ERMGT100_2_curated_scaffold_2024_8
unknown

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comp(4563..4874)
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_2024_9

Not on your lists

comp(5083..5652)
-----------------
DNA (570bp)
protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS35745.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
ERMGT100_2_curated_scaffold_2024_10

Not on your lists

comp(6010..6210)
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FL61_9BACT
GTP-binding protein YchF {ECO:0000313|EMBL:KKU68432.1}; TaxID=1618842 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_16.;"
GTP-binding protein ychF
ERMGT100_2_curated_scaffold_2024_11
GWA2_OD1_49_9, Parcubacteria, Bacteria

Not on your lists

comp(6207..7067)
-----------------
DNA (861bp)
protein (287aa)
Translation-associated GTPase {ECO:0000313|EMBL:KKW10866.1}; TaxID=1618852 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_49_9.;"
GTP-binding protein YchF; K06942 id=5803583 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ychF; GTP-binding protein YchF
ERMGT100_2_curated_scaffold_2024_12
GWD2_OD1_35_24, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7113..7340)
-----------------
DNA (228bp)
protein (76aa)
id=5803585 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKP74864.1}; TaxID=1618632 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Campbellbacteria) bacterium GW2011_GWD2_35_24.;"
ERMGT100_2_curated_scaffold_2024_13
RIFOXYD2_FULL_RIF_OD1_11_36_9_curated, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(7337..8089)
-----------------
DNA (753bp)
protein (251aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Multi-sensor hybrid histidine kinase n=1 Tax=uncultured bacterium RepID=K1Y8A5_9BACT
Tax=RIFOXYD2_FULL_RIF_OD1_11_36_9_curated
ERMGT100_2_curated_scaffold_2024_14
unknown

Not on your lists

comp(8098..8313)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_2024_15
R_RIF_OD1_12_45_17b, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(8325..9044)
-----------------
DNA (720bp)
protein (240aa)
id=3423424 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_45_17b_curated
ERMGT100_2_curated_scaffold_2024_16
RifOxyC12_full_RIF_OD1_09_46_25_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(9073..9615)
-----------------
DNA (543bp)
protein (181aa)
zwf; Glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase id=3423426 bin=GWA1_ZB2_49_26 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RifOxyC12_full_RIF_OD1_09_46_25_curated
ERMGT100_2_curated_scaffold_2024_17
R_OD1_48_14, Parcubacteria, Bacteria

Not on your lists

comp(9560..10411)
-----------------
DNA (852bp)
protein (284aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase id=3423426 bin=GWA1_ZB2_49_26 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFCSPLOWO2_01_FULL_OD1_48_14_curated
ERMGT100_2_curated_scaffold_2024_18
R_RIF_OD1_09_50_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(10444..12627)
-----------------
DNA (2184bp)
protein (728aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWT5_9BACT
fibronectin type III protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_50_20_curated
ERMGT100_2_curated_scaffold_2024_19
GWA2_OD1_42_9_A833, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(12572..13522)
-----------------
DNA (951bp)
protein (317aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVG3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS75133.1}; TaxID=1618613 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA2_42_9.;"
ERMGT100_2_curated_scaffold_2024_20
R_RIF_OD1_09_50_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(13539..14351)
-----------------
DNA (813bp)
protein (271aa)
beta-1,3-glucanase (EC:3.2.1.39)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003795C32
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_50_20_curated
ERMGT100_2_curated_scaffold_2024_21
R_RIF_OD1_09_50_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(14435..15718)
-----------------
DNA (1284bp)
protein (428aa)
Fibronectin type III domain protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J0L5_9GAMM
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_50_20_curated
Displaying 21 items

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