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ERMGT138_2_curated_scaffold_2038

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT138_2_curated_scaffold_2038_1
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..1281)
DNA (1281bp) protein (427aa)
Branched-chain amino acid ABC transporter system, substrate-binding protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PUN6_9RHOO
livK; branched-chain amino acid ABC transporter system, substrate-binding protein
Branched-chain amino acid ABC transporter system, substrate-binding protein {ECO:0000313|EMBL:BAL26310.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
ERMGT138_2_curated_scaffold_2038_2
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1313..2389)
DNA (1077bp) protein (359aa)
ABC transporter permease n=1 Tax=Cupriavidus sp. WS RepID=UPI00037FCEA7
livM2; high-affinity branched-chain amino acid transport system permease LivM
ABC transporter permease {ECO:0000313|EMBL:ESH95859.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
ERMGT138_2_curated_scaffold_2038_3
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2543..3439)
DNA (897bp) protein (299aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK79_AZOSU
branched-chain amino acid ABC-type transport system, permease component
Tax=BJP_IG2103_Rhodocyclales_63_50
ERMGT138_2_curated_scaffold_2038_4
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3605..4396)
DNA (792bp) protein (264aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037E8855
branched-chain amino acid ABC transporter ATPase
Tax=BJP_IG2103_Rhodocyclales_63_50
ERMGT138_2_curated_scaffold_2038_5
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4470..6119)
DNA (1650bp) protein (550aa)
acS2; putative Acetyl-coenzyme A synthetase (EC:6.2.1.1)
Putative Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:CAL96063.1}; EC=6.2.1.1 {ECO:0000313|EMBL:CAL96063.1};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Putative Acetyl-coenzyme A synthetase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KB57_AZOSB
ERMGT138_2_curated_scaffold_2038_6
unknown

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comp(6302..6712)
DNA (411bp) protein (137aa)

This feature has no annotations

ERMGT138_2_curated_scaffold_2038_7
unknown

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comp(6709..6936)
DNA (228bp) protein (76aa)

This feature has no annotations

ERMGT138_2_curated_scaffold_2038_8
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7112..8179)
DNA (1068bp) protein (356aa)
cytochrome c peroxidase (EC:1.11.1.5)
Cytochrome c peroxidase n=2 Tax=Nitrosococcus oceani RepID=Q3J7P6_NITOC
Tax=GWA2_Gallionellales_60_18_curated
ERMGT138_2_curated_scaffold_2038_9
unknown

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comp(8226..8552)
DNA (327bp) protein (109aa)

This feature has no annotations

ERMGT138_2_curated_scaffold_2038_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8667..9446)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI00036B48C3
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT138_2_curated_scaffold_2038_11
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9562..12822)
DNA (3261bp) protein (1087aa)
sbm1; methylmalonyl-CoA mutase (EC:5.4.99.2)
methylmalonyl-CoA mutase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F7B69E
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KIF80212.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
ERMGT138_2_curated_scaffold_2038_12
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12927..16424)
DNA (3498bp) protein (1166aa)
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:KIF80213.1}; EC=1.2.7.8 {ECO:0000313|EMBL:KIF80213.1};; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
Indolepyruvate ferredoxin oxidoreductase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0G3B6_9BURK
indolepyruvate ferredoxin oxidoreductase subunit alpha/beta
ERMGT138_2_curated_scaffold_2038_13
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16367..18235)
DNA (1869bp) protein (623aa)
ilvI2; acetolactate synthase isozyme III large subunit (EC:2.2.1.6)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (strain 197N).;"
Acetolactate synthase n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KTL4_BORA1
ERMGT138_2_curated_scaffold_2038_14
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18299..18829
DNA (531bp) protein (177aa)
Transcriptional regulator, AsnC-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HVK3_BORPD
AsnC family transcriptional regulator
Transcriptional regulator, AsnC-family {ECO:0000313|EMBL:CAP40358.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
ERMGT138_2_curated_scaffold_2038_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18830..19684
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035E9EC5
Fe3+-hydroxamate ABC transporter periplasmic protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT138_2_curated_scaffold_2038_16
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19963..20196)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=uncultured marine bacterium MedDCM-OCT-S04-C448 RepID=D6PD31_9BACT
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_43_22_curated
Displaying 16 items

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