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ERMGT157_2_curated_scaffold_6901

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT157_2_curated_scaffold_6901_1
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3..377
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036C7D27
signal transduction protein containing a membrane domain an EAL and a GGDEF domain
Tax=RBG_16_Betaproteobacteria_56_24_curated
ERMGT157_2_curated_scaffold_6901_2
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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633..902
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X852_METSD
30S ribosomal protein S15
Tax=BJP_S1_SUB10_Methylophilales_55_32
ERMGT157_2_curated_scaffold_6901_3
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1001..2203
DNA (1203bp) protein (401aa)
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
Polyribonucleotide nucleotidyltransferase n=2 Tax=Methylovorus RepID=C6X853_METSD
ERMGT157_2_curated_scaffold_6901_4
Candidatus Methylopumilus turicensis, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2203..2976
DNA (774bp) protein (258aa)
pnp; polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1581680 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium MMS-10A-171.;"
Polyribonucleotide nucleotidyltransferase n=2 Tax=Methylovorus RepID=C6X853_METSD
ERMGT157_2_curated_scaffold_6901_5
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3103..3525)
DNA (423bp) protein (141aa)
RNA polymerase-binding transcription factor DksA n=2 Tax=Methylovorus RepID=C6X854_METSD
dksA; TraR/DksA family transcriptional regulator
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
ERMGT157_2_curated_scaffold_6901_6
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3630..4358)
DNA (729bp) protein (243aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
methenyltetrahydrofolate cyclohydrolase n=1 Tax=Methylotenera mobilis RepID=UPI00035FFEFF
Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
ERMGT157_2_curated_scaffold_6901_trna_1
unknown

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4471..4544
DNA (74bp)
transferRNA Pro
ERMGT157_2_curated_scaffold_6901_trna_2
unknown

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4856..4929
DNA (74bp)
transferRNA Arg
ERMGT157_2_curated_scaffold_6901_trna_3
unknown

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4941..5013
DNA (73bp)
transferRNA His
ERMGT157_2_curated_scaffold_6901_7
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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5437..5922
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IYD1_9GAMM
FIST domain-containing protein
Tax=GWA2_Gallionellales_59_43_curated
ERMGT157_2_curated_scaffold_6901_8
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5882..6532
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IYD1_9GAMM
FIST domain containing protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
ERMGT157_2_curated_scaffold_6901_9
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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6525..7676
DNA (1152bp) protein (384aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VK6_RHOFD
PAS/PAC sensor-containing diguanylate cyclase
Tax=GWA2_Gallionellales_55_18_curated
ERMGT157_2_curated_scaffold_6901_10
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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8101..9408
DNA (1308bp) protein (436aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GXE5_METFK
two component, sigma54 specific, Fis family transcriptional regulator
Tax=BJP_S1_SUB10_Methylophilales_55_32
ERMGT157_2_curated_scaffold_6901_11
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9411..10766
DNA (1356bp) protein (452aa)
general secretion pathway protein n=1 Tax=Methylotenera RepID=UPI000379A043
exeA; sporulation domain-containing protein
Tax=BJP_S1_SUB10_Methylophilales_55_32
ERMGT157_2_curated_scaffold_6901_12
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10845..11054
DNA (210bp) protein (70aa)
Pilus (MSHA type) biogenesis protein MshL n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QNV8_METS6
pulD; pilus (msha type) biogenesis protein mshl
Pilus (MSHA type) biogenesis protein MshL {ECO:0000313|EMBL:ACT49328.1}; Flags: Precursor;; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
Displaying 15 items

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