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ERMGT319_2_curated_scaffold_146

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT319_2_curated_scaffold_146_1
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2..559
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P914_9DELT
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
ERMGT319_2_curated_scaffold_146_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(563..1423)
DNA (861bp) protein (287aa)
Esterase/lipase/thioesterase family active site pseudogene n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLL5_9PROT
Esterase/lipase/thioesterase family active site pseudogene {ECO:0000313|EMBL:CCU63889.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
esterase/lipase/thioesterase family protein
ERMGT319_2_curated_scaffold_146_3
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1420..2589)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037C8AE8
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP87967.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
ERMGT319_2_curated_scaffold_146_4
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2782..3030
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RU73_ALLVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC62732.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
ERMGT319_2_curated_scaffold_146_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3186..3746
DNA (561bp) protein (187aa)
Hydrolase-like protein 2, exosortase system type 1 associated n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DL94_9BURK
Esterase {ECO:0000313|EMBL:KIO49430.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
esterase/lipase/thioesterase family protein
ERMGT319_2_curated_scaffold_146_6
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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4154..5392
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KAL3_AZOSB
Uncharacterized protein {ECO:0000313|EMBL:CDH43050.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
ERMGT319_2_curated_scaffold_146_7
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5637..6758
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031F8A33
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ64234.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
ERMGT319_2_curated_scaffold_146_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7144..8295
DNA (1152bp) protein (384aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CCU61833.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CCU61833.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Long-chain-fatty-acid--CoA ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHK4_9PROT
fadD; long-chain-fatty-acid-CoA ligase
ERMGT319_2_curated_scaffold_146_9
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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8369..8731
DNA (363bp) protein (121aa)
Putative uncharacterized protein id=2300209 bin=GWB2_Geobacter-like_52_12 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT319_2_curated_scaffold_146_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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8813..10018
DNA (1206bp) protein (402aa)
Orn/DAP/Arg decarboxylase 2 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5L5_NITMU
Diaminopimelate decarboxylase {ECO:0000313|EMBL:KIO48825.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Orn/DAP/Arg decarboxylase 2
ERMGT319_2_curated_scaffold_146_11
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10116..11690
DNA (1575bp) protein (525aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B8Y8_9PROT
Asparagine synthase {ECO:0000313|EMBL:GAO34889.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ERMGT319_2_curated_scaffold_146_12
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11937..12626
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000366F8C6
Uncharacterized protein {ECO:0000313|EMBL:KFB66885.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
hypothetical protein
ERMGT319_2_curated_scaffold_146_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12708..13370
DNA (663bp) protein (221aa)
COGs COG0726 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK79_9PROT
COGs COG0726 {ECO:0000313|EMBL:CCU63871.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
polysaccharide deacetylase
ERMGT319_2_curated_scaffold_146_14
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13411..13581
DNA (171bp) protein (57aa)
Polysaccharide deacetylase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C029_NITHN
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ADE16276.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
ERMGT319_2_curated_scaffold_146_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13709..15082)
DNA (1374bp) protein (458aa)
O-antigen polymerase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PB32_9BURK
Polymerase {ECO:0000313|EMBL:KIO49418.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
O-Antigen Polymerase family protein
ERMGT319_2_curated_scaffold_146_16
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15298..16143)
DNA (846bp) protein (282aa)
glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase {ECO:0000313|EMBL:CAL95881.1}; EC=2.4.1.- {ECO:0000313|EMBL:CAL95881.1};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Glycosyltransferase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KAM5_AZOSB
ERMGT319_2_curated_scaffold_146_17
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16425..16799)
DNA (375bp) protein (125aa)
GDP-mannose 6-dehydrogenase (EC:1.1.1.132)
GDP-mannose 6-dehydrogenase {ECO:0000313|EMBL:ABD68424.1}; EC=1.1.1.132 {ECO:0000313|EMBL:ABD68424.1};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
GDP-mannose 6-dehydrogenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220X9_RHOFD
Displaying 17 items

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