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ERMGT436_2_curated_scaffold_11

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT436_2_curated_scaffold_11_1
unknown

Not on your lists

1..87
DNA (87bp) protein (29aa)

This feature has no annotations

ERMGT436_2_curated_scaffold_11_2
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

261..1010
DNA (750bp) protein (250aa)
Structural protein MipA n=1 Tax=Ralstonia sp. AU12-08 RepID=S9T086_9RALS
Structural protein MipA {ECO:0000313|EMBL:KHK51966.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
conserved exported protein of unknown function
ERMGT436_2_curated_scaffold_11_3
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1149..2159
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGM3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH13541.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
ERMGT436_2_curated_scaffold_11_4
Halorhodospira halophila, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2241..2957)
DNA (717bp) protein (239aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WU29_HALHL
CRP/FNR family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABM61191.1}; TaxID=349124 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halophila (strain DSM 244 / SL1) (Ectothiorhodospira; halophila (strain DSM 244 / SL1)).;"
ERMGT436_2_curated_scaffold_11_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3201..3896
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X15_RHOFD id=5223329 bin=16ft_combo_ws3_JS1 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ERMGT436_2_curated_scaffold_11_6
unknown

Not on your lists

4059..4151
DNA (93bp) protein (31aa)

This feature has no annotations

ERMGT436_2_curated_scaffold_11_trna_1
unknown

Not on your lists

comp(4228..4300)
DNA (73bp)
transferRNA Lys
ERMGT436_2_curated_scaffold_11_7
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4352..4993)
DNA (642bp) protein (214aa)
Queuosine biosynthesis protein queC n=1 Tax=mine drainage metagenome RepID=E6PLH7_9ZZZZ
ExsB ATPase
Tax=GWA2_Rhodocyclales_65_20_curated
ERMGT436_2_curated_scaffold_11_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5020..5793)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI00036DE859
TPR repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT436_2_curated_scaffold_11_9
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5793..6347)
DNA (555bp) protein (185aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPG8_ACCPU
peptidoglycan-associated lipoprotein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
ERMGT436_2_curated_scaffold_11_10
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6362..7630)
DNA (1269bp) protein (423aa)
Protein TolB n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=TOLB_AROAE
tolB; translocation protein TolB
Tax=RBG_16_Betaproteobacteria_66_20_curated
ERMGT436_2_curated_scaffold_11_11
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7646..8395)
DNA (750bp) protein (250aa)
Periplasmic protein TonB, links inner and outer membranes n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPN8_AZOSU
periplasmic protein TonB, links inner and outer membranes
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
ERMGT436_2_curated_scaffold_11_12
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8392..8820)
DNA (429bp) protein (143aa)
Cell division and transport-associated protein TolR n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5G8_NITMU
biopolymer transporter ExbD
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
ERMGT436_2_curated_scaffold_11_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8823..9506)
DNA (684bp) protein (228aa)
Protein TolQ n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPG3_ACCPU
protein TolQ
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
ERMGT436_2_curated_scaffold_11_14
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9511..9888)
DNA (378bp) protein (126aa)
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZN69_9RHOO
tol-pal system-associated acyl-CoA thioesterase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
ERMGT436_2_curated_scaffold_11_15
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9958..11004)
DNA (1047bp) protein (349aa)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Ralstonia sp. PBA RepID=I9W483_9RALS
ATP-dependent DNA helicase RuvB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT436_2_curated_scaffold_11_16
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11038..11640
DNA (603bp) protein (201aa)
OmpA domain protein transmembrane region-containing protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CU89_SIDLE
OmpA domain protein transmembrane region-containing protein
OmpA domain protein transmembrane region-containing protein {ECO:0000313|EMBL:ADE10424.1}; Flags: Precursor;; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
ERMGT436_2_curated_scaffold_11_17
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11644..12207)
DNA (564bp) protein (188aa)
ruvA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
Holliday junction DNA helicase RuvA n=1 Tax=Burkholderia kururiensis RepID=UPI000348DA8B
Tax=RBG_16_Betaproteobacteria_66_20_curated
ERMGT436_2_curated_scaffold_11_18
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12204..12719)
DNA (516bp) protein (172aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC id=2139060 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT436_2_curated_scaffold_11_19
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12716..13444)
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein RALTA_A0859 n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=Y859_CUPTR
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
ERMGT436_2_curated_scaffold_11_20
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13461..14945
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFF9_METPP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
ERMGT436_2_curated_scaffold_11_21
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14942..15838
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHF2_AZOL4
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
ERMGT436_2_curated_scaffold_11_22
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15844..16623
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q8K5_RHOPT
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
ERMGT436_2_curated_scaffold_11_23
unknown

Not on your lists

comp(16656..17024)
DNA (369bp) protein (123aa)

This feature has no annotations

ERMGT436_2_curated_scaffold_11_24
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17100..19325)
DNA (2226bp) protein (742aa)
xylC; benzaldehyde dehydrogenase (EC:1.2.1.28)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036C8F7D
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMGT436_2_curated_scaffold_11_25
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19322..20077)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000379274E
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMGT436_2_curated_scaffold_11_26
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20070..20990)
DNA (921bp) protein (307aa)
ABC transporter ATP-binding protein n=1 Tax=Acidovorax radicis RepID=UPI000237516C
branched-chain amino acid transport system permease LivM
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMGT436_2_curated_scaffold_11_27
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20987..21856)
DNA (870bp) protein (290aa)
High-affinity branched-chain amino acid transport system permease protein livh n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7G5_9BURK
High-affinity branched-chain amino acid transporter permease LivH
Tax=RBG_16_Betaproteobacteria_66_20_curated
ERMGT436_2_curated_scaffold_11_28
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21910..23094)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EDDA33
branched-chain amino acid ABC transporter substrate-binding protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
ERMGT436_2_curated_scaffold_11_29
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23243..24721
DNA (1479bp) protein (493aa)
succinate-semialdehyde dehdyrogenase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034879F5
succinate-semialdehyde dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Displaying items 1-30 of 36 in total

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