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ERMGT500_2_curated_scaffold_0

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Displaying items 1-30 of 246 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_0_1
Pseudoalteromonas ruthenica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177..458
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI0003641E23
Uncharacterized protein {ECO:0000313|EMBL:KJY95743.1}; TaxID=151081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas ruthenica.;"
ERMGT500_2_curated_scaffold_0_2
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(477..1289)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H710_9BRAD
Aldolase {ECO:0000313|EMBL:KJC40777.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
class II aldolase/adducin family protein
ERMGT500_2_curated_scaffold_0_3
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1527..2705
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EDDA33
branched-chain amino acid ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
ERMGT500_2_curated_scaffold_0_4
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2772..3641
DNA (870bp) protein (290aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Acidovorax sp. CF316 RepID=J1EE02_9BURK
High-affinity branched-chain amino acid transporter permease LivH
Tax=RBG_16_Betaproteobacteria_66_20_curated
ERMGT500_2_curated_scaffold_0_5
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3649..4566
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E572A2
branched-chain amino acid transport system permease LivM
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMGT500_2_curated_scaffold_0_6
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4559..5314
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000379274E
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMGT500_2_curated_scaffold_0_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5311..7536
DNA (2226bp) protein (742aa)
xylC; benzaldehyde dehydrogenase (EC:1.2.1.28)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036C8F7D
Tax=RBG_16_Betaproteobacteria_66_20_curated
ERMGT500_2_curated_scaffold_0_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7604..8047
DNA (444bp) protein (148aa)
isoquinoline 1-oxidoreductase n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289FC33
Isoquinoline 1-oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_0_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8142..8369)
DNA (228bp) protein (76aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_0_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8384..10702)
DNA (2319bp) protein (773aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CU44_9RHIZ
Carbon-monoxide dehydrogenase large subunit
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_0_11
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10741..11163)
DNA (423bp) protein (141aa)
Ribonuclease VapC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SKJ9_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_0_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11144..11398)
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMGT500_2_curated_scaffold_0_13
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(11482..12957)
DNA (1476bp) protein (492aa)
Amidohydrolase family n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q095I4_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KIJ77837.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
amidohydrolase family
ERMGT500_2_curated_scaffold_0_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12970..13725)
DNA (756bp) protein (252aa)
Short-chain dehydrogenase id=2247805 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_73_35_curated
ERMGT500_2_curated_scaffold_0_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13746..14420)
DNA (675bp) protein (225aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT500_2_curated_scaffold_0_16
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14599..16161
DNA (1563bp) protein (521aa)
Na+/H+ antiporter n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC95_CONWI
Na+/H+ antiporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_0_17
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16190..17140
DNA (951bp) protein (317aa)
Putative exported protein n=1 Tax=Bordetella bronchiseptica D445 RepID=K4TUW1_BORBO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_0_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(17157..18128)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000377AB4C
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMGT500_2_curated_scaffold_0_19
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18152..19255)
DNA (1104bp) protein (368aa)
Taurine catabolism dioxygenase TauD/TfdA n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZK5_9GAMM
Taurine catabolism dioxygenase TauD/TfdA {ECO:0000313|EMBL:EIJ36798.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
taurine catabolism dioxygenase TauD/TfdA
ERMGT500_2_curated_scaffold_0_20
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19389..20576
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E41E81
putative 3-hydroxybenzoate 6-hydroxylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT500_2_curated_scaffold_0_21
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20808..22490
DNA (1683bp) protein (561aa)
Amidohydrolase family protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K7R2_SACES
Amidohydrolase family protein
Amidohydrolase family protein {ECO:0000313|EMBL:CCH32658.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
ERMGT500_2_curated_scaffold_0_22
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22595..23653
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036CC090
hypothetical protein y4wF
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT500_2_curated_scaffold_0_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23721..24629
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Streptomyces sp. Wigar10 RepID=UPI0002EC24DB
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT500_2_curated_scaffold_0_24
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24687..25874
DNA (1188bp) protein (396aa)
ABC transporter substrate binding protein (Branched amino acid) n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2YDA3_9PROT
branched-chain amino acid ABC transporter periplasmic protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
ERMGT500_2_curated_scaffold_0_25
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26023..26982)
DNA (960bp) protein (320aa)
Amidohydrolase 2 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVF7_RHOP2
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_0_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27052..27987)
DNA (936bp) protein (312aa)
Fumarylacetoacetate (FAA) hydrolase family protein id=4695032 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
fumarylacetoacetate (FAA) hydrolase family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMGT500_2_curated_scaffold_0_27
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28023..28736)
DNA (714bp) protein (238aa)
glutathione S-transferase P subunit (EC:2.5.1.18)
Putative glutathione S-transferase P subunit n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P641_AROAE
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ERMGT500_2_curated_scaffold_0_28
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28844..30247)
DNA (1404bp) protein (468aa)
Amidase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JW65_9PROT
amidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_0_29
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30300..31565)
DNA (1266bp) protein (422aa)
major facilitator transporter id=5080812 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
major facilitator transporter
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ERMGT500_2_curated_scaffold_0_30
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(31562..31960)
DNA (399bp) protein (133aa)
Phenylacetic acid degradation-related protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IX48_RHOP2
phenylacetic acid degradation-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying items 1-30 of 246 in total

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