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ERMGT500_2_curated_scaffold_34

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Displaying items 31-45 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_34_29
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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36644..39385
-----------------
DNA (2742bp)
protein (914aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein id=4839853 bin=GWC2_Syntrophus__56_31 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Gammaproteobacteria_66_13_curated
ERMGT500_2_curated_scaffold_34_30
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39609..41654
-----------------
DNA (2046bp)
protein (682aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037963AF
putative PAS/PAC sensor histidine kinase
Putative PAS/PAC sensor histidine kinase {ECO:0000313|EMBL:BAL26320.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
ERMGT500_2_curated_scaffold_34_31
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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41671..42357
-----------------
DNA (687bp)
protein (229aa)
Two component LuxR family transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AL37_9PROT
LuxR family transcriptional regulator {ECO:0000313|EMBL:GAO35786.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
two component LuxR family transcriptional regulator
ERMGT500_2_curated_scaffold_34_32
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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42476..43612
-----------------
DNA (1137bp)
protein (379aa)
Methyl-accepting chemotaxis protein n=1 Tax=Aeromonas salmonicida subsp. pectinolytica 34mel RepID=T0P856_AERSA
Chemotaxis protein {ECO:0000313|EMBL:GAO37379.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
chemotaxis protein
ERMGT500_2_curated_scaffold_34_33

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43620..43988
-----------------
DNA (369bp)
protein (123aa)
Chemotaxis protein CheY n=1 Tax=mine drainage metagenome RepID=E6PM86_9ZZZZ
Chemotaxis protein CheY {ECO:0000313|EMBL:CBH96038.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
response regulator receiver protein
ERMGT500_2_curated_scaffold_34_34
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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43985..44359
-----------------
DNA (375bp)
protein (125aa)
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator receiver protein id=3786120 bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
Tax=GWB2_Deltaproteobacteria_55_19_curated
ERMGT500_2_curated_scaffold_34_35
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

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44356..44709
-----------------
DNA (354bp)
protein (118aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TBQ6_RICCO
putative NTP binding protein (contains STAS domain)
Tax=RBG_16_Betaproteobacteria_56_24_curated
ERMGT500_2_curated_scaffold_34_36
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44706..46937
-----------------
DNA (2232bp)
protein (744aa)
cheA1; putative chemotaxis protein histidine kinase (EC:2.7.13.1)
Putative chemotaxis protein histidine kinase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K2H0_AZOSB
Tax=RBG_16_Betaproteobacteria_56_24_curated
ERMGT500_2_curated_scaffold_34_37
unknown

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46965..47129
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_34_38
Leptospira licerasiae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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47172..49865
-----------------
DNA (2694bp)
protein (898aa)
PAS domain S-box protein n=1 Tax=Leptospira licerasiae str. MMD4847 RepID=V6GCR4_9LEPT
PAS domain S-box protein {ECO:0000313|EMBL:EIE01744.1}; TaxID=1049972 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira licerasiae serovar Varillal str. VAR 010.;"
methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor
ERMGT500_2_curated_scaffold_34_39
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49940..50521
-----------------
DNA (582bp)
protein (194aa)
CheW protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CS84_SIDLE
CheW protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
ERMGT500_2_curated_scaffold_34_40
Pseudomonas mediterranea, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50530..51402
-----------------
DNA (873bp)
protein (291aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=1348058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mediterranea CFBP 5447.;"
Chemotaxis protein methyltransferase n=2 Tax=Pseudomonas fluorescens group RepID=M4JY61_9PSED
chemotaxis response, glutamate methyltransferase
ERMGT500_2_curated_scaffold_34_41
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51399..51911
-----------------
DNA (513bp)
protein (171aa)
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Thauera phenylacetica B4P RepID=N6YB71_9RHOO
CheD, stimulates methylation of MCP protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
ERMGT500_2_curated_scaffold_34_42
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51922..53007
-----------------
DNA (1086bp)
protein (362aa)
chemotaxis-specific methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IVE6_9GAMM
Tax=RBG_16_Betaproteobacteria_56_24_curated
ERMGT500_2_curated_scaffold_34_43
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53007..53546
-----------------
DNA (540bp)
protein (180aa)
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CS81_SIDLE
cheD; chemotaxis protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
Displaying items 31-45 of 45 in total

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