ggKbase home page

ERMGT500_2_curated_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_34_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..226
-----------------
DNA (225bp)
protein (75aa)
Methyltransferase type 11 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D023_VARPS
SAM-dependent methyltransferase {ECO:0000313|EMBL:KIL04666.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
SAM-dependent methyltransferase
ERMGT500_2_curated_scaffold_34_2
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1082..1282
-----------------
DNA (201bp)
protein (67aa)
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_34_trna_1
unknown

Not on your lists

1508..1580
-----------------
DNA (73bp)
transferRNA Ala
ERMGT500_2_curated_scaffold_34_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1684..2775
-----------------
DNA (1092bp)
protein (364aa)
response regulator receiver sensor signal transduction histidine kinase (EC:2.7.13.3)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGC5_9BACT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT500_2_curated_scaffold_34_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2772..3425
-----------------
DNA (654bp)
protein (218aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSJ0_9BACT
two component LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_34_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3585..3974
-----------------
DNA (390bp)
protein (130aa)
Response regulator receiver protein id=3068380 bin=GWC2_Methylomirabilis_70_16 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
response regulator receiver domain-containing protein
Tax=RBG_16_Actinobacteria_67_10_curated
ERMGT500_2_curated_scaffold_34_6
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3971..9763
-----------------
DNA (5793bp)
protein (1931aa)
Sensory box/GGDEF family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEZ4_9PROT
response regulator receiver/GGDEF/PAS/PAC domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_34_7
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9878..13456
-----------------
DNA (3579bp)
protein (1193aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6N3_NITMU
response regulator receiver/GGDEF/PAS/PAC domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_34_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13488..15452)
-----------------
DNA (1965bp)
protein (655aa)
amino acid transporter n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003467366
amino acid permease family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT500_2_curated_scaffold_34_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15449..15802)
-----------------
DNA (354bp)
protein (118aa)
TPR repeat protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJA3_ACCPU
TPR repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_34_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15877..16257
-----------------
DNA (381bp)
protein (127aa)
Conserved hypothetical endoribonuclease L-PSP n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K2N8_AZOSB
endoribonuclease L-PSP
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_34_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16262..18298
-----------------
DNA (2037bp)
protein (679aa)
ATP-dependent DNA helicase RecG n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AEW0_9PROT
recG; ATP-dependent DNA helicase RecG
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_34_12
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18334..19224
-----------------
DNA (891bp)
protein (297aa)
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIK2_9PROT
ubiA; 4-hydroxybenzoate polyprenyl transferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_34_13
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19247..20725
-----------------
DNA (1479bp)
protein (493aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase id=1321839 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=CG_Beta_01
ERMGT500_2_curated_scaffold_34_14
CG_Epsilon_01, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20778..21422)
-----------------
DNA (645bp)
protein (215aa)
Tax=CG_Epsilon_01
ERMGT500_2_curated_scaffold_34_15
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21849..22145
-----------------
DNA (297bp)
protein (99aa)
10 kDa chaperonin n=1 Tax=Thauera sp. 63 RepID=N6Y222_9RHOO
groES; chaperonin GroES
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_34_16
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22175..23830
-----------------
DNA (1656bp)
protein (552aa)
Chaperonin GroEL n=1 Tax=mine drainage metagenome RepID=T0YUF4_9ZZZZ
groEL; chaperonin GroEL
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_34_17
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24159..24359
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124K2_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE46040.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
ERMGT500_2_curated_scaffold_34_18
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24483..27245
-----------------
DNA (2763bp)
protein (921aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124K1_POLSJ
sensor signal transduction histidine kinase
ERMGT500_2_curated_scaffold_34_19
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27247..27615
-----------------
DNA (369bp)
protein (123aa)
Response regulator receiver protein n=1 Tax=Thauera phenylacetica B4P RepID=N6Z417_9RHOO
response regulator receiver protein
Tax=CG_Rhodocyc_01
ERMGT500_2_curated_scaffold_34_20
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27616..29775
-----------------
DNA (2160bp)
protein (720aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124J9_POLSJ
Tax=CG_Rhodocyc_01
ERMGT500_2_curated_scaffold_34_21
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29756..31177
-----------------
DNA (1422bp)
protein (474aa)
Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCP6_GALCS
putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase {ECO:0000313|EMBL:ADL56628.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
ERMGT500_2_curated_scaffold_34_22
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31365..31988
-----------------
DNA (624bp)
protein (208aa)
Response regulator n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPR1_AZOSU
response regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMGT500_2_curated_scaffold_34_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32100..32363
-----------------
DNA (264bp)
protein (88aa)
Membrane protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TIR3_TISMK
membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ERMGT500_2_curated_scaffold_34_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32379..34169
-----------------
DNA (1791bp)
protein (597aa)
Na+/solute symporter (Ssf family) n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TIR2_TISMK
Na+/solute symporter (Ssf family)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ERMGT500_2_curated_scaffold_34_25
unknown

Not on your lists

34252..34548
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_34_26
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34545..35162)
-----------------
DNA (618bp)
protein (206aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000378C76B
Uncharacterized protein {ECO:0000313|EMBL:ESZ18200.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
esterase
ERMGT500_2_curated_scaffold_34_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35242..35553
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036541F4
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ERMGT500_2_curated_scaffold_34_28
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35569..35880
-----------------
DNA (312bp)
protein (104aa)
UPI0003CFC880 related cluster n=1 Tax=unknown RepID=UPI0003CFC880
Uncharacterized protein {ECO:0000313|EMBL:ESZ18201.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
ERMGT500_2_curated_scaffold_34_trna_2
unknown

Not on your lists

35969..36041
-----------------
DNA (73bp)
transferRNA Phe
Displaying items 1-30 of 45 in total

View Taxonomy