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ERMGT500_2_curated_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_35_1
unknown

Not on your lists

157..330
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

ERMGT500_2_curated_scaffold_35_2
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1060..2832)
-----------------
DNA (1773bp)
protein (591aa)
id=12554997 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
ERMGT500_2_curated_scaffold_35_3
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3719..4072)
-----------------
DNA (354bp)
protein (118aa)
Regulatory protein MarR n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZKF9_ANACC
Putative transcriptional regulator {ECO:0000313|EMBL:KFB74833.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
regulatory protein MarR
ERMGT500_2_curated_scaffold_35_4
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4069..4362)
-----------------
DNA (294bp)
protein (98aa)
Uncharacterized protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZIM4_ANACC
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_35_5
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4416..6434)
-----------------
DNA (2019bp)
protein (673aa)
peptide ABC transporter ATPase (EC:3.6.3.24 3.6.3.31)
Peptide ABC transporter ATPase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2U6_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_35_6
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6431..8014)
-----------------
DNA (1584bp)
protein (528aa)
Candidate ABC type oligopeptide transport system, ATP-binding component with duplicated domains n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXR2_RAMTT
oligopeptide ABC transporter ATP-binding protein with duplicated domains
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_35_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8011..9108)
-----------------
DNA (1098bp)
protein (366aa)
peptide ABC transporter permease n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E818AD
ABC-type uncharacterized transport system, permease component
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_35_8
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9113..10159)
-----------------
DNA (1047bp)
protein (349aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AV2_POLSJ
binding-protein-dependent transport systems inner membrane component
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_35_9
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10173..11975)
-----------------
DNA (1803bp)
protein (601aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00031C4BC2
ABC-type oligopeptide transport system, periplasmic component
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_35_10
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11972..13684)
-----------------
DNA (1713bp)
protein (571aa)
putative ABC transporter ATP-binding protein (EC:3.6.3.25)
Putative ABC transporter ATP-binding protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AA73_COLFT
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_35_11
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13681..14736)
-----------------
DNA (1056bp)
protein (352aa)
Putative ABC trasporter, permease protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AA72_COLFT
oppC; Oligopeptide transport system permease protein OppC
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_35_12
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14733..15671)
-----------------
DNA (939bp)
protein (313aa)
Uncharacterized protein n=1 Tax=Acinetobacter parvus NIPH 1103 RepID=N8RH61_9GAMM
oligopeptide/dipeptide ABC transporter membrane protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_35_13
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15676..17433)
-----------------
DNA (1758bp)
protein (586aa)
Heme-binding protein A n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AA67_COLFT
hbpA; heme-binding protein A
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_35_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17524..18327
-----------------
DNA (804bp)
protein (268aa)
enoyl-ACP reductase n=1 Tax=Methyloversatilis universalis RepID=UPI0003683D2D
enoyl-(acyl carrier protein) reductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_35_15
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18337..20232)
-----------------
DNA (1896bp)
protein (632aa)
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EQ2_DECAR
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_35_trna_3
unknown

Not on your lists

comp(20287..20360)
-----------------
DNA (74bp)
transferRNA Asp
ERMGT500_2_curated_scaffold_35_trna_2
unknown

Not on your lists

comp(20468..20540)
-----------------
DNA (73bp)
transferRNA Val
ERMGT500_2_curated_scaffold_35_16
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20600..20872)
-----------------
DNA (273bp)
protein (91aa)
Bacterial nucleoid DNA-binding protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJU0_AZOSU
nucleoid DNA-binding protein
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
ERMGT500_2_curated_scaffold_35_17
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21276..23684)
-----------------
DNA (2409bp)
protein (803aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=2 Tax=Thauera RepID=C4K9T9_THASP
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_35_18
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23773..25035)
-----------------
DNA (1263bp)
protein (421aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAB8_9PROT
clpX; ATP-dependent protease ATP-binding subunit ClpX
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_35_19
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25049..25717)
-----------------
DNA (669bp)
protein (223aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
Clp protease proteolytic subunit ClpP n=1 Tax=Thiobacillus thioparus RepID=UPI000367DA02
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
ERMGT500_2_curated_scaffold_35_20
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25714..27018)
-----------------
DNA (1305bp)
protein (435aa)
Trigger factor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL10_9PROT
tig; trigger factor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_35_trna_1
unknown

Not on your lists

comp(27040..27121)
-----------------
DNA (82bp)
transferRNA Leu
ERMGT500_2_curated_scaffold_35_21
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27248..28060
-----------------
DNA (813bp)
protein (271aa)
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI000379533C
squalene/phytoene synthase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_35_22
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28057..28890
-----------------
DNA (834bp)
protein (278aa)
Phytoene synthase (EC:2.5.1.32)
phytoene synthase n=1 Tax=Massilia niastensis RepID=UPI000375990C
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_35_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28866..30185
-----------------
DNA (1320bp)
protein (440aa)
Squalene-associated FAD-dependent desaturase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAB9_9PROT
squalene-associated FAD-dependent desaturase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_35_24
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30172..31062)
-----------------
DNA (891bp)
protein (297aa)
Dyp-type peroxidase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ85_9BACT
Dyp-type peroxidase
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
ERMGT500_2_curated_scaffold_35_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31066..32421)
-----------------
DNA (1356bp)
protein (452aa)
DNA repair protein radA n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRI2_SIDLE
DNA repair protein RadA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT500_2_curated_scaffold_35_26
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32421..33560)
-----------------
DNA (1140bp)
protein (380aa)
Alanine racemase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EJ9_DECAR
alanine racemase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_35_27
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33619..34932
-----------------
DNA (1314bp)
protein (438aa)
Major Facilitator Superfamily transporter n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LNG1_9BURK
major facilitator superfamily permease
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Displaying items 1-30 of 80 in total

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