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ERMGT500_2_curated_scaffold_88

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_88_1
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..144)
DNA (144bp) protein (48aa)
Methylitaconate delta2-delta3-isomerase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TN2_RHOP5
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(331..1086)
DNA (756bp) protein (252aa)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GCG0_9BRAD
fabG; 3-oxoacyl-ACP reductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1308..2141)
DNA (834bp) protein (278aa)
Squalene/phytoene synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6I7_NITMU
squalene/phytoene synthase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2299..3102)
DNA (804bp) protein (268aa)
squalene synthase HpnC (EC:2.5.1.32)
Squalene synthase HpnC n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SGU5_GALCS
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_trna_1
unknown

Not on your lists

3207..3288
DNA (82bp)
transferRNA Leu
ERMGT500_2_curated_scaffold_88_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3407..4714
DNA (1308bp) protein (436aa)
Trigger factor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL10_9PROT
tig; trigger factor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4714..5337
DNA (624bp) protein (208aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=12498312 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
clpP; ATP-dependent Clp protease proteolytic subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5362..6633
DNA (1272bp) protein (424aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=CLPX_NITMU
clpX; ATP-dependent protease ATP-binding subunit ClpX
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6797..9202
DNA (2406bp) protein (802aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSU5_SIDLE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9564..9836
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL13_9PROT
histone family protein DNA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_trna_2
unknown

Not on your lists

9954..10026
DNA (73bp)
transferRNA Val
ERMGT500_2_curated_scaffold_88_trna_3
unknown

Not on your lists

10130..10203
DNA (74bp)
transferRNA Asp
ERMGT500_2_curated_scaffold_88_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10349..12325
DNA (1977bp) protein (659aa)
Peptidyl-prolyl cis-trans isomerase PpiD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DWH4_9PROT
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12368..13159)
DNA (792bp) protein (264aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GJQ1_NITSI
enoyl-(acyl carrier protein) reductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13359..15524
DNA (2166bp) protein (722aa)
Extracellular solute-binding protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AK69_9PROT
extracellular solute-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15533..16510
DNA (978bp) protein (326aa)
Binding-protein dependent transport system inner membrane protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA00_9PROT
binding-protein dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT500_2_curated_scaffold_88_14
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16603..18039
DNA (1437bp) protein (479aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6J8_NITMU
binding-protein dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_15
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18168..20225
DNA (2058bp) protein (686aa)
peptide ABC transporter ATPase (EC:3.6.3.24 3.6.3.31)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BME2_9GAMM
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_16
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20340..21785)
DNA (1446bp) protein (482aa)
Membrane-bound lytic murein transglycosylase D n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFX4_9PROT
lytic transglycosylase catalytic subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_17
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22019..22819)
DNA (801bp) protein (267aa)
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J9_NITMU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_18
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22979..23749
DNA (771bp) protein (257aa)
Methyltransferase type 11 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CS10_SIDLE
methyltransferase type 11
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_88_19
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23772..24224
DNA (453bp) protein (151aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CS11_SIDLE
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_88_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24340..25044
DNA (705bp) protein (235aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III epsilon subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHF5_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMGT500_2_curated_scaffold_88_21
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25079..25915)
DNA (837bp) protein (279aa)
NADH pyrophosphatase n=1 Tax=Azoarcus sp. KH32C RepID=H0PZE5_9RHOO
NPY1; NTP pyrophosphohydrolase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_88_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25987..26958
DNA (972bp) protein (324aa)
GDP-L-fucose synthase n=1 Tax=Methyloversatilis universalis RepID=UPI00036501C1
GDP-L-fucose synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT500_2_curated_scaffold_88_23
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27238..28164
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S3K3_9BURK
putative proline rich transmembrane protein
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
ERMGT500_2_curated_scaffold_88_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28303..28746
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003656F0F
tyep II secretion system protein G
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT500_2_curated_scaffold_88_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28743..29939
DNA (1197bp) protein (399aa)
Type II secretion system F domain protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DMD3_METS0
Type II secretion system F domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT500_2_curated_scaffold_88_26
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29936..31624
DNA (1689bp) protein (563aa)
Type II secretion system protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJB9_THIDA
type II secretion system protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
ERMGT500_2_curated_scaffold_88_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31605..32441
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSX2_SIDLE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying items 1-30 of 39 in total

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