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ERMGT615_2_curated_scaffold_424

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT615_2_curated_scaffold_424_trna_1
unknown

Not on your lists

comp(61..144)
DNA (84bp)
transferRNA Leu
ERMGT615_2_curated_scaffold_424_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

364..1602
DNA (1239bp) protein (413aa)
Extracellular ligand-binding receptor id=4160335 bin=GWC2_Syntrophus__56_31 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT615_2_curated_scaffold_424_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1700..2491
DNA (792bp) protein (264aa)
Branched-chain amino acid transport ATP-binding protein LivG id=4160334 bin=GWC2_Syntrophus__56_31 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT615_2_curated_scaffold_424_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2478..3194
DNA (717bp) protein (239aa)
Branched-chain amino acid transport ATP-binding protein LivF id=4160333 bin=GWC2_Syntrophus__56_31 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
ABC-type branched-chain amino acid transport systems, ATPase component
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT615_2_curated_scaffold_424_4
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3201..4199
DNA (999bp) protein (333aa)
ABC transporter permease protein id=4160332 bin=GWC2_Syntrophus__56_31 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
ABC transporter permease
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT615_2_curated_scaffold_424_5
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4199..5068
DNA (870bp) protein (290aa)
High-affinity branched-chain amino acid transport system permease protein LivH id=4113131 bin=GWF2_Lentisphaerae_52_8 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
amino acid ABC transporter
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT615_2_curated_scaffold_424_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5084..5974
DNA (891bp) protein (297aa)
Aerobic-type carbon monoxide dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UIY2_9RHOB
CoxM; aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT615_2_curated_scaffold_424_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5971..6486
DNA (516bp) protein (172aa)
Xanthine dehydrogenase iron-sulfur subunit n=1 Tax=Rhodovulum sp. PH10 RepID=J6JFM8_9RHOB
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT615_2_curated_scaffold_424_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6483..7652
DNA (1170bp) protein (390aa)
Chlorophyll synthesis pathway protein BchC n=2 Tax=Clostridium RepID=N9Z7I6_9CLOT
putative L-threonine 3-dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMGT615_2_curated_scaffold_424_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7665..8576
DNA (912bp) protein (304aa)
Asp/Glu racemase id=4160326 bin=GWC2_Syntrophus__56_31 species=Agrobacterium tumefaciens genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT615_2_curated_scaffold_424_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8631..10031
DNA (1401bp) protein (467aa)
Xanthine dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UHP1_9RHOB
aldehyde oxidase and xanthine dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT615_2_curated_scaffold_424_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10028..11047
DNA (1020bp) protein (340aa)
Xanthine dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PVA1_9RHOB
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT615_2_curated_scaffold_424_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11126..12163
DNA (1038bp) protein (346aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B682_9PROT
queA; s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT615_2_curated_scaffold_424_13
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12252..13358
DNA (1107bp) protein (369aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AMI3_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT615_2_curated_scaffold_424_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13417..13641
DNA (225bp) protein (75aa)
preprotein translocase subunit YajC n=1 Tax=Rhodocyclaceae RepID=UPI000378921A
yajC; preprotein translocase subunit YajC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Displaying 15 items

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