ggKbase home page

ERMGT630_2_curated_scaffold_341

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT630_2_curated_scaffold_341_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3..911)
DNA (909bp) protein (303aa)
Putative integral membrane transport protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G387_SORC5 id=5224878 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
integral membrane transport protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT630_2_curated_scaffold_341_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(904..1845)
DNA (942bp) protein (314aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G391_SORC5 id=5224877 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter ATP-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT630_2_curated_scaffold_341_3
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1971..2735)
DNA (765bp) protein (255aa)
Beta-lactamase domain protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QEI6_DESB2
Uncharacterized protein {ECO:0000313|EMBL:KKB81637.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
beta-lactamase
ERMGT630_2_curated_scaffold_341_4
unknown

Not on your lists

comp(2770..3708)
DNA (939bp) protein (313aa)

This feature has no annotations

ERMGT630_2_curated_scaffold_341_5
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3815..4372)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SNR3_PLAL2
hypothetical protein
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
ERMGT630_2_curated_scaffold_341_6
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4369..5058)
DNA (690bp) protein (230aa)
Electron transport protein SCO1/SenC n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJV8_HALO1
electron transporter SCO1/SenC
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ACY18465.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
ERMGT630_2_curated_scaffold_341_7
unknown

Not on your lists

comp(5018..5467)
DNA (450bp) protein (150aa)
hypothetical protein
ERMGT630_2_curated_scaffold_341_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5491..6120)
DNA (630bp) protein (210aa)
Cytochrome c oxidase subunit III id=1881833 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ctaE; putative transmembrane cytochrome oxidase subunit
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMGT630_2_curated_scaffold_341_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6143..7054)
DNA (912bp) protein (304aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
protoheme IX farnesyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029AFFD7
protoheme IX farnesyltransferase
ERMGT630_2_curated_scaffold_341_10
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(7051..7956)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R2V6_ISOPI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
ERMGT630_2_curated_scaffold_341_11
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8037..9863)
DNA (1827bp) protein (609aa)
cytochrome-c oxidase (EC:1.9.3.1)
Cytochrome-c oxidase {ECO:0000313|EMBL:ADB17594.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ADB17594.1};; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
Cytochrome-c oxidase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R8Q3_PIRSD
ERMGT630_2_curated_scaffold_341_12
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9867..10646)
DNA (780bp) protein (260aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
Cytochrome c oxidase subunit 2 n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R8Q4_PIRSD
cytochrome c oxidase subunit II
ERMGT630_2_curated_scaffold_341_13
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10649..12049)
DNA (1401bp) protein (467aa)
Cytochrome c class I n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R8Q5_PIRSD
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ADB17596.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
ERMGT630_2_curated_scaffold_341_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12273..13349
DNA (1077bp) protein (359aa)
glycine cleavage system t protein (EC:2.1.2.10)
Aminomethyltransferase, putative id=4584613 bin=GWF2_Methylomirabilis_70_14 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
ERMGT630_2_curated_scaffold_341_15
unknown

Not on your lists

comp(13422..14474)
DNA (1053bp) protein (351aa)

This feature has no annotations

ERMGT630_2_curated_scaffold_341_16
unknown

Not on your lists

14623..15558
DNA (936bp) protein (312aa)

This feature has no annotations

ERMGT630_2_curated_scaffold_341_17
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15623..16789
DNA (1167bp) protein (389aa)
Aminotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020Q6_SOLUE id=5223443 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
class I and II aminotransferase
Tax=RBG_16_Deltaproteobacteria_49_23_curated
ERMGT630_2_curated_scaffold_341_18
unknown

Not on your lists

16892..17776
DNA (885bp) protein (295aa)

This feature has no annotations

ERMGT630_2_curated_scaffold_341_19
unknown

Not on your lists

comp(18139..18360)
DNA (222bp) protein (74aa)

This feature has no annotations

ERMGT630_2_curated_scaffold_341_20

Not on your lists

18602..19720
DNA (1119bp) protein (373aa)
Marine sediment metagenome DNA, contig: S01H1_S16684 {ECO:0000313|EMBL:GAG18355.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ERMGT630_2_curated_scaffold_341_21
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(19808..21004)
DNA (1197bp) protein (399aa)
galactokinase (EC:2.7.1.6)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Galactokinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LL08_CHLTF
ERMGT630_2_curated_scaffold_341_22
unknown

Not on your lists

21128..21454
DNA (327bp) protein (109aa)

This feature has no annotations

ERMGT630_2_curated_scaffold_341_23
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(21426..22169)
DNA (744bp) protein (248aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5TJ99_9PLAN
glycoside transferase family protein
Tax=CG_Arma_02
ERMGT630_2_curated_scaffold_341_24
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22166..23191)
DNA (1026bp) protein (342aa)
dfrA; dihydroflavonol-4-reductase (EC:1.1.1.219)
Dihydroflavonol-4-reductase {ECO:0000313|EMBL:CAE77813.1}; EC=1.1.1.219 {ECO:0000313|EMBL:CAE77813.1};; TaxID=264462 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529; / HD100).;"
Dihydroflavonol-4-reductase n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MRE5_BDEBA
ERMGT630_2_curated_scaffold_341_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(23188..25242)
DNA (2055bp) protein (685aa)
histidine kinase (EC:2.7.13.3) id=12554054 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
periplasmic sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMGT630_2_curated_scaffold_341_26
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

25289..26143
DNA (855bp) protein (285aa)
ADP-heptose:LPS heptosyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDA7_CHLTF
ADP-heptose--LPS heptosyltransferase
ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:AEP11967.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Displaying 26 items

View Taxonomy