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ERMGT800_2_curated_scaffold_2540

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT800_2_curated_scaffold_2540_1
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..684)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036DDD80
eutA; Ethanolamine utilization protein eutA
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
ERMGT800_2_curated_scaffold_2540_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(690..1583)
DNA (894bp) protein (298aa)
Tetratricopeptide TPR_2 repeat protein id=4127116 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT800_2_curated_scaffold_2540_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1736..2500)
DNA (765bp) protein (255aa)
Mammalian cell entry related domain protein id=1724318 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
mammalian cell entry related domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT800_2_curated_scaffold_2540_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2550..3206)
DNA (657bp) protein (219aa)
hypothetical protein
ABC-type transport system involved in resistance to organic solvents ATPase component-like protein id=1724319 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT800_2_curated_scaffold_2540_5
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(3203..3979)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSN3_SIDLE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
ERMGT800_2_curated_scaffold_2540_trna_4
unknown

Not on your lists

comp(4065..4138)
DNA (74bp)
transferRNA Arg
ERMGT800_2_curated_scaffold_2540_trna_3
unknown

Not on your lists

comp(4189..4278)
DNA (90bp)
transferRNA Ser
ERMGT800_2_curated_scaffold_2540_6
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4408..6132)
DNA (1725bp) protein (575aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein id=4839853 bin=GWC2_Syntrophus__56_31 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
sensor diguanylate cyclase/phosphodiesterase, PAS and PAS domain-containing
Tax=RBG_16_Betaproteobacteria_66_20_curated
ERMGT800_2_curated_scaffold_2540_trna_2
unknown

Not on your lists

comp(6331..6420)
DNA (90bp)
transferRNA Ser
ERMGT800_2_curated_scaffold_2540_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6470..7699)
DNA (1230bp) protein (410aa)
Aspartokinase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CS07_SIDLE
aspartate kinase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_2540_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7862..8170
DNA (309bp) protein (103aa)
Transcriptional regulator, XRE family protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJZ4_9PROT
transcriptional regulator, XRE family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT800_2_curated_scaffold_2540_9
unknown

Not on your lists

comp(8293..8850)
DNA (558bp) protein (186aa)

This feature has no annotations

ERMGT800_2_curated_scaffold_2540_10
unknown

Not on your lists

9008..10084
DNA (1077bp) protein (359aa)

This feature has no annotations

ERMGT800_2_curated_scaffold_2540_11
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10081..10752)
DNA (672bp) protein (224aa)
Putative histidine kinase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13N96_BURXL
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMGT800_2_curated_scaffold_2540_12
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10794..11663)
DNA (870bp) protein (290aa)
Diguanylate cyclase n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DJ84_METS0
diguanylate cyclase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
ERMGT800_2_curated_scaffold_2540_trna_1
unknown

Not on your lists

comp(11843..11929)
DNA (87bp)
transferRNA Ser
ERMGT800_2_curated_scaffold_2540_13
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12108..12818
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLS8_SIDLE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
ERMGT800_2_curated_scaffold_2540_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12859..14154)
DNA (1296bp) protein (432aa)
23S rRNA methyltransferase n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003657151
rumA; 23S rRNA 5-methyluridine methyltransferase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_2540_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14169..14942)
DNA (774bp) protein (258aa)
3'-5' exonuclease, PolB-like protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLT2_SIDLE
3'-5' exonuclease, PolB-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT800_2_curated_scaffold_2540_16
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14964..15209)
DNA (246bp) protein (82aa)
Cysteine synthase B n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHX4_AZOSU
cysteine synthase B
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
Displaying 20 items

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