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ERMGT800_2_curated_scaffold_130

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT800_2_curated_scaffold_130_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..493)
DNA (492bp) protein (164aa)
DNA repair protein RadC n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1P0_9PROT
radC; DNA repair protein RadC
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_130_2
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

548..1738
DNA (1191bp) protein (397aa)
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase / Phosphopantothenate-cysteine ligase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BB0_DECAR
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT800_2_curated_scaffold_130_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1751..2200
DNA (450bp) protein (150aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000366A620
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT800_2_curated_scaffold_130_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2265..6623
DNA (4359bp) protein (1453aa)
DEAD/H associated domain protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QN46_METTR
DEAD/DEAH box helicase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT800_2_curated_scaffold_130_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6733..8016)
DNA (1284bp) protein (428aa)
sulfide dehydrogenase (flavocytochrome), flavoprotein subunit (EC:1.-.-.-)
Sulfide dehydrogenase (Flavocytochrome), flavoprotein subunit n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BB4_DECAR
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_130_6
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8026..8343)
DNA (318bp) protein (106aa)
Cytochrome c, class I n=1 Tax=Thauera sp. 28 RepID=N6YS81_9RHOO
cytochrome c553
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT800_2_curated_scaffold_130_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8477..10756)
DNA (2280bp) protein (760aa)
ATP-dependent Clp protease ATP-binding subunit ClpA (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RC74_9RHOO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT800_2_curated_scaffold_130_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10809..11105)
DNA (297bp) protein (99aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=CLPS_NITMU
ATP-dependent Clp protease adaptor protein ClpS
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT800_2_curated_scaffold_130_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11464..11670
DNA (207bp) protein (69aa)
Cold shock-like protein CspD (CSP-D) n=5 Tax=Oxalobacteraceae RepID=A4G7U0_HERAR
cspD; Cold shock protein CspD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT800_2_curated_scaffold_130_10
Anguilla anguilla, Anguilla, Anguilliformes, Neopterygii, Chordata, Metazoa

Not on your lists

11937..12110
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:JAH02430.1}; TaxID=7936 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae; Anguilla.;" source="Anguilla anguilla (European freshwater eel) (Muraena anguilla).;"
ERMGT800_2_curated_scaffold_130_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12632..12832
DNA (201bp) protein (67aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT800_2_curated_scaffold_130_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12905..13348
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJF3_AZOSU
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_130_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13411..13905)
DNA (495bp) protein (165aa)
hypothetical protein
Putative uncharacterized protein id=1342213 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_130_14
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13907..14005)
DNA (99bp) protein (33aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT800_2_curated_scaffold_130_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14107..15462)
DNA (1356bp) protein (452aa)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B574_9PROT
exodeoxyribonuclease VII large subunit
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_130_16
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15843..16478
DNA (636bp) protein (212aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKF2_ACCPU
flagellar motor protein MotA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT800_2_curated_scaffold_130_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16475..16891
DNA (417bp) protein (139aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA90_NITMU
biopolymer transport protein ExbD/TolR
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_130_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16910..17917
DNA (1008bp) protein (336aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRL5_SIDLE
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_130_19
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17898..18083
DNA (186bp) protein (62aa)
UPF0434 protein NH8B_3343 n=2 Tax=Pseudogulbenkiania RepID=G2IYI3_PSEUL
Trm112p-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT800_2_curated_scaffold_130_20
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18198..18887
DNA (690bp) protein (230aa)
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=KDSB_AROAE
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_130_21
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19026..19580
DNA (555bp) protein (185aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
adk_[H]; Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Limnobacter sp. MED105 RepID=A6GTS3_9BURK
ERMGT800_2_curated_scaffold_130_22
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19594..20853
DNA (1260bp) protein (420aa)
6-phosphofructokinase n=1 Tax=Beggiatoa sp. PS RepID=A7BRD1_9GAMM
6-phosphofructokinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT800_2_curated_scaffold_130_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20932..23004
DNA (2073bp) protein (691aa)
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJC3_AZOSU
vacuolar-type H(+)-translocating pyrophosphatase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_130_24
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23056..24429
DNA (1374bp) protein (458aa)
id=3484017 bin=GWA1_Treponema_62_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT800_2_curated_scaffold_130_25
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24438..24569
DNA (132bp) protein (44aa)
hppA; V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
pyrophosphatase n=1 Tax=Duganella zoogloeoides RepID=UPI0003667ABE
ERMGT800_2_curated_scaffold_130_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25427..25987)
DNA (561bp) protein (187aa)
G/U mismatch-specific uracil-DNA glycosylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II84_KORVE
G/U mismatch-specific uracil-DNA glycosylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT800_2_curated_scaffold_130_27
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25980..26921)
DNA (942bp) protein (314aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase id=1350204 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT800_2_curated_scaffold_130_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26911..28668)
DNA (1758bp) protein (586aa)
DNA mismatch repair protein MutL n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WV02_METML
DNA mismatch repair protein MutL
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT800_2_curated_scaffold_130_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28767..29183
DNA (417bp) protein (139aa)
membrane protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003808A78
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Displaying 29 items

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