ggKbase home page

ERMGT800_2_curated_scaffold_961

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT800_2_curated_scaffold_961_1
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146..1636)
-----------------
DNA (1491bp)
protein (497aa)
succinic semialdehyde dehydrogenase (EC:1.2.1.24)
Succinate-semialdehyde dehydrogenase I n=1 Tax=Oceanibaculum indicum P24 RepID=K2IXD1_9PROT
Succinate-semialdehyde dehydrogenase I {ECO:0000313|EMBL:EKE75111.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ERMGT800_2_curated_scaffold_961_2
unknown

Not on your lists

comp(1812..1937)
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

ERMGT800_2_curated_scaffold_961_3
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1942..2133)
-----------------
DNA (192bp)
protein (64aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3ITP4_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGW22565.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
ERMGT800_2_curated_scaffold_961_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2449..3234
-----------------
DNA (786bp)
protein (262aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJN9_9PROT
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMGT800_2_curated_scaffold_961_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3245..4426
-----------------
DNA (1182bp)
protein (394aa)
Putative 2-nitropropane dioxygenase, NPD n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G526_HERAR
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_961_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4499..5209)
-----------------
DNA (711bp)
protein (237aa)
Integral membrane protein-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02D09_SOLUE
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_64_85_curated
ERMGT800_2_curated_scaffold_961_7
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5421..6389
-----------------
DNA (969bp)
protein (323aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI92244.1}; TaxID=1454005 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
ERMGT800_2_curated_scaffold_961_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6519..7298)
-----------------
DNA (780bp)
protein (260aa)
oxidoreductase n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A2653
short chain dehydrogenase family protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_961_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7318..8238)
-----------------
DNA (921bp)
protein (307aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHF2_AZOL4
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMGT800_2_curated_scaffold_961_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8316..9041
-----------------
DNA (726bp)
protein (242aa)
Probable transcriptional regulatory protein yebC n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9Q3_9PROT
yebC; hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_961_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9081..9614
-----------------
DNA (534bp)
protein (178aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC id=2139060 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_961_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9611..10192
-----------------
DNA (582bp)
protein (194aa)
Holliday junction DNA helicase RuvA n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F5BEA4
ATP-dependent DNA helicase RuvA
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_961_13
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10283..11467
-----------------
DNA (1185bp)
protein (395aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C2W5_DESTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM23906.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
ERMGT800_2_curated_scaffold_961_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11504..12544
-----------------
DNA (1041bp)
protein (347aa)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR26_9PROT
Holliday junction ATP-dependent DNA helicase ruvB
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_961_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12541..12963
-----------------
DNA (423bp)
protein (141aa)
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMS0_SIDLE
tol-pal system-associated acyl-CoA thioesterase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_961_16
unknown

Not on your lists

12960..13058
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

ERMGT800_2_curated_scaffold_961_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13055..13771
-----------------
DNA (717bp)
protein (239aa)
Protein TolQ n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPG3_ACCPU
protein TolQ
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_961_18
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13795..14187
-----------------
DNA (393bp)
protein (131aa)
Protein TolR n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AF68_9PROT
biopolymer transporter ExbD
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT800_2_curated_scaffold_961_19
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14188..14901
-----------------
DNA (714bp)
protein (238aa)
Periplasmic protein TonB, links inner and outer membranes n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPN8_AZOSU
periplasmic protein TonB, links inner and outer membranes
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_961_20
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14992..16125
-----------------
DNA (1134bp)
protein (378aa)
Protein TolB n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPN7_AZOSU
tol-pal system beta propeller repeat protein TolB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT800_2_curated_scaffold_961_21
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16212..16742
-----------------
DNA (531bp)
protein (177aa)
OmpA/MotB domain-containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AKC9_9PROT
OmpA/MotB domain-containing protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_961_22
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16747..17526
-----------------
DNA (780bp)
protein (260aa)
YbgF subunit of Tol-Pal Cell Envelope Complex n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T0W2_JANMA
ybgF; Tol-Pal cell envelope complex subunit YbgF
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT800_2_curated_scaffold_961_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17580..18584
-----------------
DNA (1005bp)
protein (335aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036A7D7F
YeeE/YedE
Tax=RBG_16_Betaproteobacteria_64_18_curated
Displaying 23 items

View Taxonomy