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ERMGT828_2_curated_scaffold_56

Search features with annotation key words

Displaying items 121-150 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT828_2_curated_scaffold_56_121
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(106077..107261)
-----------------
DNA (1185bp)
protein (395aa)
elongation factor Tu n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B34810
tuf; translation elongation factor Tu, putative
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
ERMGT828_2_curated_scaffold_56_122
unknown

Not on your lists

comp(107536..107964)
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_56_123
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(107990..108427)
-----------------
DNA (438bp)
protein (146aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
ERMGT828_2_curated_scaffold_56_124
unknown

Not on your lists

comp(108463..108804)
-----------------
DNA (342bp)
protein (114aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_56_125
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(108817..109209)
-----------------
DNA (393bp)
protein (131aa)
S23 ribosomal protein n=1 Tax=uncultured bacterium RepID=K2FLJ8_9BACT
S23 ribosomal protein {ECO:0000313|EMBL:KKP57887.1}; TaxID=1618715 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_34_10.;"
S23 ribosomal protein
ERMGT828_2_curated_scaffold_56_126
R_SM2F11_46_24, SM2F11, Bacteria

Not on your lists

comp(109262..111385)
-----------------
DNA (2124bp)
protein (708aa)
Elongation factor G id=2900085 bin=GWC2_CPR2_39_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC2_CPR2_39_35 organism_group=CPR2 organism_desc=Candidate for curation
fusA; Elongation factor G
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
ERMGT828_2_curated_scaffold_56_127
unknown

Not on your lists

111529..111726
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_56_128
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists


comp(111863..112447)
-----------------
DNA (585bp)
protein (195aa)
30S ribosomal protein S7 n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI000375744A
rpsL; 30S ribosomal protein S7
Tax=BJP_IG2158_OD1_28_51
ERMGT828_2_curated_scaffold_56_129
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists


comp(112526..112939)
-----------------
DNA (414bp)
protein (138aa)
30S ribosomal protein S12 n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SIE5_9FIRM id=17284 bin=ACD1 species=Parvimonas micra genus=Parvimonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
rpsL; 30S ribosomal protein S12
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
ERMGT828_2_curated_scaffold_56_130
unknown

Not on your lists

113323..113535
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_56_131
unknown

Not on your lists

113548..113826
-----------------
DNA (279bp)
protein (93aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_56_132
unknown

Not on your lists

113973..114188
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_56_133
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

comp(114294..114905)
-----------------
DNA (612bp)
protein (204aa)
Peptidase M50 id=2882928 bin=GWF2_OP3_43_52 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
peptidase M50
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
ERMGT828_2_curated_scaffold_56_134
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists

comp(115308..115496)
-----------------
DNA (189bp)
protein (63aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
ERMGT828_2_curated_scaffold_56_135
RHI_RIF_OD1_10_44_12b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(115667..116071)
-----------------
DNA (405bp)
protein (135aa)
Uncharacterized protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QT14_METSZ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_10_44_12b_curated
ERMGT828_2_curated_scaffold_56_136
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(116236..116652)
-----------------
DNA (417bp)
protein (139aa)
hypothetical protein id=5045794 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
ERMGT828_2_curated_scaffold_56_137
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(116757..118433)
-----------------
DNA (1677bp)
protein (559aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.1); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] id=15189302 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
purH; bifunctional purine biosynthesis protein PurH (EC:2.1.2.3 3.5.4.10)
Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
ERMGT828_2_curated_scaffold_56_138
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(118452..119159)
-----------------
DNA (708bp)
protein (236aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037003C0
maf protein
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
ERMGT828_2_curated_scaffold_56_139
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(119152..120006)
-----------------
DNA (855bp)
protein (285aa)
type 1 fatty acid desaturase (EC:1.14.19.1)
Fatty-acid desaturase n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DNH2_9CHRO
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
ERMGT828_2_curated_scaffold_56_trna_1
unknown

Not on your lists

120114..120184
-----------------
DNA (71bp)
transferRNA Pro
ERMGT828_2_curated_scaffold_56_140
unknown

Not on your lists

comp(120593..120886)
-----------------
DNA (294bp)
protein (98aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_56_141
R_SM2F11_43_23, SM2F11, Bacteria

Not on your lists

comp(121263..122216)
-----------------
DNA (954bp)
protein (318aa)
Chromosome (Plasmid) partitioning protein ParB / Stage 0 sporulation protein J id=3001288 bin=GWC1_CPR2_39_9 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
parB-like partition protein
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_43_23_curated
ERMGT828_2_curated_scaffold_56_142
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122236..122607)
-----------------
DNA (372bp)
protein (124aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E5U6_GEOLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD96187.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
ERMGT828_2_curated_scaffold_56_trna_4
unknown

Not on your lists

comp(122659..122739)
-----------------
DNA (81bp)
transferRNA Leu
ERMGT828_2_curated_scaffold_56_143
R_SM2F11_50_11, SM2F11, Bacteria

Not on your lists

comp(122751..123560)
-----------------
DNA (810bp)
protein (270aa)
undecaprenol kinase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W4I1_DESAS
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_50_11_curated
ERMGT828_2_curated_scaffold_56_144
R_OD1_Kaiserbacteria_56_24, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(123560..124168)
-----------------
DNA (609bp)
protein (203aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_56_24_curated
ERMGT828_2_curated_scaffold_56_145
R_SM2F11_43_23, SM2F11, Bacteria

Not on your lists

comp(124171..125421)
-----------------
DNA (1251bp)
protein (417aa)
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase (Fragment) n=1 Tax=uncultured bacterium RepID=K2B3M1_9BACT
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_43_23_curated
ERMGT828_2_curated_scaffold_56_146
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

comp(125555..126700)
-----------------
DNA (1146bp)
protein (382aa)
hypothetical protein id=5801373 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
proP2; permeases of the major facilitator superfamily
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
ERMGT828_2_curated_scaffold_56_147
R_SM2F11_43_23, SM2F11, Bacteria

Not on your lists

comp(126732..127346)
-----------------
DNA (615bp)
protein (205aa)
SUA5/YciO/YrdC/YwlC family translation factor; K07566 putative translation factor id=23345 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
yciO; Putative translation factor (SUA5)
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_43_23_curated
ERMGT828_2_curated_scaffold_56_148
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists


comp(127425..130271)
-----------------
DNA (2847bp)
protein (949aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase id=4783216 bin=GWC2_OD1_43_27 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
Displaying items 121-150 of 225 in total

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