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PLM4_65_b1_redo_sep16_scaffold_14178

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_14178_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1063
DNA (1062bp) protein (354aa)
Amino acid transporter bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio sp. U5L genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amino acid transporter-like protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_14178_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1279..1473
DNA (195bp) protein (65aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_14178_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1503..2156
DNA (654bp) protein (218aa)
phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17)
Phosphatidylethanolamine N-methyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_14178_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2343..2543)
DNA (201bp) protein (67aa)
Sec-independent protein translocase protein TatA bin=GWD2_Deltaproteobacteria_55_8 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
twin-arginine translocation protein, TatA/E family
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_14178_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2552..2851)
DNA (300bp) protein (100aa)
protease Do (EC:3.4.21.108)
Putative Serine protease do-like bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_14178_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2827..3969)
DNA (1143bp) protein (381aa)
protease Do (EC:3.4.21.107)
Putative Serine protease do-like bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_14178_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4129..5481
DNA (1353bp) protein (451aa)
Mg/Co/Ni transporter; K06213 magnesium transporter bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Mg/Co/Ni transporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_14178_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5478..6440)
DNA (963bp) protein (321aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DB37_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_14178_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6437..7099)
DNA (663bp) protein (221aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XN92_9BACT
phosphoribosylglycinamide formyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_14178_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7109..8152)
DNA (1044bp) protein (348aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CH59_DESK7
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_14178_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8245..9036)
DNA (792bp) protein (264aa)
ABC transporter related protein bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_14178_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9064..10074)
DNA (1011bp) protein (337aa)
ABC transporter substrate-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
membrane lipoprotein lipid attachment site
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_14178_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10097..10873)
DNA (777bp) protein (259aa)
ABC transporter permease protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
binding-protein-dependent transporter inner membrane component family protein 65
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 13 items

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