ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_10414

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_10414_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..478
DNA (477bp) protein (159aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_10414_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

485..1351
DNA (867bp) protein (289aa)
UPF0042 nucleotide-binding protein COCOR_07137 bin=GWD2_Deltaproteobacteria_55_8 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glmZ(sRNA)-inactivating NTPase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_10414_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1356..1631
DNA (276bp) protein (92aa)
Phosphotransferase system, phosphocarrier protein HPr bin=GWD2_Deltaproteobacteria_55_8 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phosphotransferase system, phosphocarrier protein HPr
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_10414_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1707..2885
DNA (1179bp) protein (393aa)
S-adenosylmethionine synthase bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
metK-1; S-adenosylmethionine synthetase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_10414_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2917..4185
DNA (1269bp) protein (423aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_10414_6
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4366..4947
DNA (582bp) protein (194aa)
Cysteine dioxygenase type I Tax=uncultured bacterium RepID=C6L1E7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE46816.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
PLM4_65_b1_redo_sep16_scaffold_10414_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4993..6708
DNA (1716bp) protein (572aa)
ansA1; L-asparaginase II (EC:3.5.1.1)
Uncharacterized protein Tax=Hydrocarboniphaga effusa AP103 RepID=I8T3N1_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_10414_8
Bacillus sp. BR449, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6734..7807
DNA (1074bp) protein (358aa)
nitrile hydratase subunit alpha (EC:4.2.1.84)
Nitrile hydratase alpha subunit Tax=Bacillus sp. BR449 RepID=Q9L541_9BACI
Nitrile hydratase alpha subunit {ECO:0000313|EMBL:AAF69002.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. BR449.;"
PLM4_65_b1_redo_sep16_scaffold_10414_9
unknown

Not on your lists

7816..8097
DNA (282bp) protein (94aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_10414_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

8585..8902
DNA (318bp) protein (106aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YW9_SOLUE
hypothetical protein
Tax=RBG_16_Nitrospirae_64_22_curated
PLM4_65_b1_redo_sep16_scaffold_10414_11
unknown

Not on your lists

comp(8932..9054)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_10414_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9308..9634)
DNA (327bp) protein (109aa)
Putative uncharacterized protein Tax=Sphingobium sp. SYK-6 RepID=G2IN11_9SPHN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 12 items

View Taxonomy