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PLM4_65_b1_redo_sep16_scaffold_5683

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5683_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..900
DNA (900bp) protein (300aa)
Putative competence-damage inducible protein bin=GWD2_Deltaproteobacteria_55_8 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
competence/damage-inducible protein CinA
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_5683_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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905..1477
DNA (573bp) protein (191aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
2'-5' RNA ligase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_5683_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1502..2557
DNA (1056bp) protein (352aa)
Protein RecA bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
recA protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_5683_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2642..3073
DNA (432bp) protein (144aa)
Regulatory protein RecX bin=GWD2_Deltaproteobacteria_55_8 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
regulatory protein RecX
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_5683_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3081..5717
DNA (2637bp) protein (879aa)
Alanine--tRNA ligase bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
alaS; alanyl-tRNA ligase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_5683_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5786..6214
DNA (429bp) protein (143aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_5683_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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6211..7236
DNA (1026bp) protein (342aa)
PhoH family protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phoH protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5683_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7282..8418)
DNA (1137bp) protein (379aa)
DegP2 peptidase Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RI98_DESPD
DegP2 peptidase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_5683_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8658..9056)
DNA (399bp) protein (133aa)
Heat shock protein Hsp20 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AKS8_PELPD
Uncharacterized protein {ECO:0000313|EMBL:ETX04484.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
heat shock protein Hsp20
PLM4_65_b1_redo_sep16_scaffold_5683_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9095..9328)
DNA (234bp) protein (78aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037B9AA5
Uncharacterized protein {ECO:0000313|EMBL:ETX00058.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_5683_11
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

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comp(9334..9552)
DNA (219bp) protein (73aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037B9AA5
hypothetical protein
Tax=RBG_13_RIF03_48_7_curated
PLM4_65_b1_redo_sep16_scaffold_5683_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9988..10998)
DNA (1011bp) protein (337aa)
Chaperone protein DnaJ bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dnaJ1; putative chaperone protein DnaJ
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_5683_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11032..13152)
DNA (2121bp) protein (707aa)
lon; DNA-binding ATP-dependent protease La (EC:3.4.21.53)
Lon protease Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETX7_BRASB
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 13 items

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