ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_6222

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6222_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..138)
DNA (138bp) protein (46aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6222_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

360..1352
DNA (993bp) protein (331aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_6222_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1356..3089)
DNA (1734bp) protein (578aa)
Glycosyl transferase, family 39 bin=GWD2_Deltaproteobacteria_55_8 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dolichyl-phosphate-mannose-protein mannosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_6222_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3089..4603)
DNA (1515bp) protein (505aa)
Glycosyl transferase, family 39 bin=GWD2_Deltaproteobacteria_55_8 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dolichyl-phosphate-mannose-protein mannosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_6222_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4620..6374)
DNA (1755bp) protein (585aa)
Glycosyl transferase family 39 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glycosyl transferase family protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_6222_6
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

comp(6446..7657)
DNA (1212bp) protein (404aa)
Glycosyl transferase, family 9 Tax=Halomonas titanicae BH1 RepID=L9UEW1_9GAMM
glycosyl transferase family 9
Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
PLM4_65_b1_redo_sep16_scaffold_6222_7
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(7795..8220)
DNA (426bp) protein (142aa)
Uncharacterized protein bin=GWC2_Pelobacter_58_13 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM4_65_b1_redo_sep16_scaffold_6222_8
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8430..9830)
DNA (1401bp) protein (467aa)
two-component sensor histidine kinase bin=bin1_lowGC species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
two-component sensor histidine kinase
Tax=CG_Desulfarul_01
PLM4_65_b1_redo_sep16_scaffold_6222_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(9811..10485)
DNA (675bp) protein (225aa)
OmpR family two-component response regulator bin=bin1_lowGC species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
OmpR family two-component response regulator
Tax=CSP1_2_Dadabacteria
PLM4_65_b1_redo_sep16_scaffold_6222_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10768..11742)
DNA (975bp) protein (325aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TPK7_9CHLR
D-isomer specific 2-hydroxyacid dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_65_b1_redo_sep16_scaffold_6222_11
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11969..12538)
DNA (570bp) protein (190aa)
hypothetical protein Tax=Nocardiopsis salina RepID=UPI0003748260
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Displaying 11 items

View Taxonomy